Single and collective cell dynamics, cell shape changes, and cell migration can be conveniently represented by the Cellular Potts Model, a computational platform based on minimization of a Hamiltonian while permitting stochastic fluctuations. Using the fact that a force field is easily derived from a scalar energy (F = −∇H), we develop a simple algorithm to associate effective forces with cell shapes in the CPM. We display the predicted forces for single cells of various shapes and sizes (relative to cell rest-area and cell rest-perimeter). While CPM forces are specified directly from the Hamiltonian on the cell perimeter, we infer internal forces using interpolation, and refine the results with smoothing. Predicted forces compare favorably with experimentally measured cellular traction forces. We show that a CPM model with internal signaling (such as Rho-GTPase-related contractility) can be associated with retraction-protrusion forces that accompany cell shape changes and migration. We adapt the computations to multicellular systems, showing, for example, the forces that a pair of swirling cells exert on one another, demonstrating that our algorithm works equally well for interacting cells. Finally, we show forces associated with the dynamics of classic cell-sorting experiments in larger clusters of model cells.
Author summaryCells exert forces on their surroundings and on one another. In simulations of cell shape using the Cellular Potts Model (CPM), the dynamics of deforming cell shapes is traditionally represented by an energy-minimization method. We use this CPM energy, the Hamiltonian, to derive and visualize the corresponding forces exerted by the cells. We use the fact that force is the negative gradient of energy to assign forces to the CPM cell edges, and then extend the results to interior forces by interpolation. We show that this method works for single as well as multiple interacting model cells, both static and motile. Finally, we show favorable comparison between predicted forces and real forces measured experimentally. Introduction 1 From embryogenesis and throughout life, cells exert forces on one another and on their 2 surroundings. Cell and tissue forces drive cell shape changes and cell migration by 3 regulating cell signaling and inducing remodeling of the cytoskeleton. Along with 4 progress in experimental quantification of cellular forces, there has been much activity 5 in modeling and developing computational platforms to explore cellular mechanobiology.6In some platforms, among them vertex-based and cell-center based simulations, the 7 shape of a cell is depicted by convex polygons, ellipsoids or spheres. 8 PLOS 1/47 The Cellular Potts Model (CPM) is a convenient computational platform that allows 9 for a variety of irregular and highly fluctuating cell shapes. Unlike vertex-based 10 computations, the CPM easily accommodates cell detachment or reattachment from an 11 aggregate, and a range of cell-cell adhesion. It also captures stochastic aspects of cell 12 movement. At the same time, s...