Predictive Model for Covid-19 Incidence in a Medium-Sized Municipality in Brazil (Ponta Grossa, Paraná)

Abstract

Objective: to produce a predictive model for the incidence of COVID-19 cases, severity and deaths in Ponta Grossa, state of Paraná. Methods: this is an ecological study with data from confirmed cases of COVID-19 reported between March 21, 2020 and May 3, 2020 in Ponta Grossa and proportion of severity, hospitalization and lethality in the literature. A susceptible-infected-recovered (SIR) epidemic model was developed, and reproduction rate (R0), duration of epidemic, peak period, number of cases, hospitalized patients and deaths were estimated. Deaths were calculated by age group and in three scenarios: at day 24, at day 34, and at day 44 of the epidemic. Results: in the three scenarios assessed in this study, the variation in the number of cases was explained by an exponential curve (r2=0.74, 0.79 and 0.89, respectively, p<0.0001 in all scenarios). The SIR model estimated that, in the best scenario, the peak period will be around 120 days after the first case (between July 11, 2020 and July 25, 2020), estimated R0 will be 1.07 and will infect 0.23% of the population. In the worst scenario, peak period will involve 4,375 (95% CI; 4156-4594) cases and 825 (95% CI; 700-950) cases in the best scenario. Most cases and hospital admissions will involve patients aged 20 to 39 years, the number of deaths will be higher among the elderly and more pronounced among patients aged ≥80 years. Conclusion: this is the first study that provides COVID-19 projections for a municipality that is not a large capital. It shows a peak period at a later moment; therefore, the municipality will have more time to prepare and adopt protective measures to reduce the number of simultaneous cases.

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