2024
DOI: 10.1093/bioadv/vbae074
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Predmoter—cross-species prediction of plant promoter and enhancer regions

Felicitas Kindel,
Sebastian Triesch,
Urte Schlüter
et al.

Abstract: Motivation Identifying cis-regulatory elements (CREs) is crucial for analyzing gene regulatory networks. Next generation sequencing methods were developed to identify CREs but represent a considerable expenditure for targeted analysis of few genomic loci. Thus, predicting the outputs of these methods would significantly cut costs and time investment. Results We present Predmoter, a deep neural network that predicts base-wise … Show more

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