The construction history and subsequent usage of burial mounds are an important testimony for socio‐economic transformation in prehistoric societies. The Baalberge–Schneiderberg burial mound, subject of the presented study, falls in this category as it is considered as an important monument that indicates the emergence of early social stratification during the Chalcolithic period in central Europe. This hypothesis relies on the chronological development of the burial mound, which is not fully understood until now. Therefore, a reconstruction of the complex stratigraphy of the burial mound including construction phases and later alterations is highly relevant for archaeological research, but the required excavations would be onerous and inconsistent with preservation efforts. In this paper, we demonstrate that non‐invasive geophysical prospection, especially seismic sounding with shear and Love waves, is suitable to obtain the required stratigraphic information, if seismic full waveform inversion (FWI) and reflection imaging are applied. Complementary information on the preservation state of the mound is obtained through Electrical Resistivity Tomography (ERT) and Electromagnetic Induction (EMI) measurements. To support the seismic and geoelectric results, we utilize Dynamic Testing (DynP), geoarchaeological corings, 14C‐Dating and archaeological records. Our investigations reveal two construction phases of the Baalberge–Schneiderberg mound. The 14C‐Dating yields dates for the older burial mound that are contemporary to the Chalcolithic Baalberge group (4000–3400 bc). During the Early Bronze Age (EBA), the mound was enlarged to its final size by people of the Aunjetitz/Únětice society (2300–1600 bc). However, both seismic and geoelectric depth sections show an extensive disturbance of the original stratigraphy due to former excavations. For this reason, the exact shape of the older burial mound cannot be determined exactly. Based on our data, we estimate that its height was below 2 m. In consequence, the original Baalberge burial mound was less monumental as until now assumed, which potentially prompting a revision of its significance as indicator for social differentiation.