t(12;21)(p13;q22)[ETV6-RUNX1] is the most common chromosomal translocation in childhood acute lymphoblastic leukemia, and it can often be backtracked to Guthrie cards supporting prenatal initiation and high levels of circulating t(12;21)-positive cells at birth. To explore the prevalence of ETV6-RUNX1-positive cells in healthy neonates, mononuclear cells from 1417 umbilical cord blood samples were isolated within 24 hours from birth and subsequently screened for ETV6-RUNX1 transcripts using a highly sensitive real-time reverse transcription polymerase chain reaction assay. In first-run polymerase chain reaction, 14 samples were positive at levels below 10 ؊5 , of which specific hybridization reflecting the relevant genetic region was positive in 9 cases. Repeated analyses using stored mRNA and flowcytometric sorting of a CD19 ؉ , CD8 ؉ , and CD19 ؊ /CD8 ؊ subpopulations from cryopreserved mononuclear cells from the same cord blood samples (mean sorted: 18 ؋ 10 6 cells) revealed no positive findings, which demonstrates that the level and/or frequency of ETV6-RUNX1-positive cells is markedly lower than suggested in previous studies.
IntroductionThe development of childhood B-cell lineage acute lymphoblastic leukemia (ALL) involves (at least) 2 genetic events (hits), 1 the first of which frequently arises prenatally. [2][3][4][5][6][7][8][9][10][11] Unless the postnatal genetic hit(s) is inevitable, the prevalence of newborns harboring preleukemic first hit-cells should exceed the cumulative incidence of the corresponding leukemia. Accordingly, gene transcripts from the most common childhood ALL chromosomal translocation, t(12;21)(p13;q22)[ETV6-RUNX1], were demonstrated in approximately 1% of healthy newborns in one British study, 12 corresponding to 100-fold the cumulative incidence of ETV6-RUNX1-positive ALL in childhood. 13 Noteworthy, the positive cells were reported to occur at levels of 10 Ϫ3 -10 Ϫ4 , and a threshold of 10 Ϫ5 was used for classification of t(12;2)-positive samples with no report of subthreshold frequencies. 12 Since these results are important for mapping the natural history of t(12;21)-positive ALL and furthermore limits the options for future screening, we assessed the prevalence of ETV6-RUNX-positive cells in 1417 newborns.
MethodsMononucleated cells (MNCs) were isolated from umbilical cord blood (UCB) samples from healthy, full-term newborns through Ficoll density centrifugation 14 within 24 hours after birth to minimize cellular and/or mRNA degradation. 15 This study was approved by the Danish Data Protection Agency and the Danish Scientific Ethics Committee.mRNA from Ն 2.5 ϫ 10 6 MNCs was extracted using a KingFisher mL robot (ThermoFisher) and the MagAttrackDirect mRNA-M48 Kit (QIAGEN): 750 L of lysis solution, 75 L of magnetic beads, and 550 L of washing solution IϩII. mRNA was eluted in 50 L of RNase-free water, divided into 2 tubes, and stored at Ϫ80°C until use. Surplus MNCs were cryopreserved in liquid nitrogen. For subsequent flow cytometrically sorted subpopulations, mRNA was c...