The X-ray crystal structures of six salts composed of amino acids
and sulfonated azo dyes have been
determined, four of them at low temperature (173 K). The compounds
are
dl-lysine/4-[(4-hydroxyphenyl)azo]benzenesulfonate (HABS) monohydrate (1),
dl-lysine/7-hydroxy-8-(phenylazo)-1,3-naphthalenedisulfonate
(Orange
G) dihydrate (2), l-lysine/Orange G 1.5-hydrate
(3), dl-histidine/Orange G trihydrate
(4), l-histidine/Orange G
trihydrate (5), and tosylarginine methyl ester
(TAME)/4-[(2-hydroxy-6-tert-butyl-1-naphthalenyl)azo]benzenesulfonate
(“Little Rock Orange,” LRO) (6). By virtue of their
basic side chains, these amino acids are the ones most
important
in the binding interactions between proteins and sulfated
macromolecules such as glycosaminoglycans in living
systems. The sulfonate salts described here serve as model systems
for these interactions. Close intermolecular
approaches between the dye sulfonate groups and neighboring amino acids
and water molecules are examined, and
the graph-set formalism is used to describe packing patterns and to
identify corresponding interactions in different
crystal structures. The recurrence of certain interactions between
sulfonate groups and amino acid functional groups
in these small-molecule crystal structures, including numerous
interactions mediated by water molecules, suggests
specificity that may also be a feature of the interactions between
proteins and sulfated biological macromolecules.