Biantennary glycopeptides from bovine fibrinogen were fluorescence labeled at each branch specifically for conformational studies by fluorescence energy transfer. Glycopeptides (by Pronase digestion) were separated by anion-exchange chromatography based on the degree of sialylation. The major monosialyl biantennary glycopeptides (see below) were used as substrates for galactose oxidase and periodate oxidation. Recognition of carbohydrates is a form of biological signal which is rapidly gaining attention in recent years (e.g. Ref. 1). To better understand the interaction between oligosaccharides and proteins, information about the solution conformation of oligosaccharides is indispensable. NMR is the most frequently used technique for studies of solution conformation of oligosaccharide (2-4). However, the NMR technique is most suitable for measurement of distances in the range of 2-5 Å, and for the 10 -50-Å distances, resonance energy transfer is more suitable.
Gal(1-4Resonance energy transfer techniques have been used to measure intramolecular distances in biological molecules such as proteins, oligonucleotides, and lipids (5-8). Recently, we have demonstrated the usefulness of fluorescence energy transfer measurement in the conformational analysis of some complex-type oligosaccharide (9, 10). In these studies, the solution conformations of triantennary glycopeptides derived from bovine fetuin was examined. The glycopeptide was modified with a naphthyl group at the N terminus of the peptide and with a dansyl 1 group at one of the Gal residues. Time resolved energy transfer measurement revealed that two of the three antennae of oligosaccharide were flexible. In order to extend such studies to biantennary glycopeptide, we have chosen to use the major monosialylated biantennary glycopeptide derived from readily available bovine fibrinogen of the structure shown in Fig. 1 (11).Controlled periodate oxidation (12) was used to oxidize the terminal NeuAc7 on the Man␣(1-3)Man branch, and galactose oxidase was used to oxidize the terminal Gal6 on the Man␣(1-6)Man branch. The oxo-galactose or oxo-sialic acid were easily modified with 2-(dansylamido)ethylamine by reductive amination. These doubly fluorescent-labeled glycopeptides were used for energy transfer measurement to study the conformation of the biantennary glycopeptide (see the accompanying paper, Ref. 27). Moreover, the unlabeled branch of the fluorescent labeled glycopeptide was removed stepwise by successive exoglycosidase digestion followed, and conformational changes of the resulting series of derivatives were measured, by the same technique as described previously (13).
EXPERIMENTAL PROCEDURES
MaterialsBovine fibrinogen (95% clottable) was obtained from Miles, Inc. (Kankakee, Il). Pronase (protease, Streptomyces griseus) was purchased from CalBiochem (La Jolla, CA). Neuraminidase from Arthobacter ureafaciens was a gift from Dr. Yoji Tsukada (Kyoto Research Institute, Uji, Japan). Glycopeptidase A was purchased from Seikagaku America, * This work was support...