SUMMARY
Copper plays a critical role in prion protein (PrP) physiology. Cu2+ binds with high affinity to the PrP N-terminal octarepeat domain (OR), and intracellular copper promotes PrP expression. The molecular details of copper coordination within the OR are now well characterized. Here we examine how Cu2+ influences the interaction between the PrP N-terminal domain and the C-terminal globular domain. Using NMR and copper-nitroxide double electron-electron resonance (DEER) EPR, with molecular dynamics refinement, we localize the position of Cu2+ in its high-affinity OR-bound state. Our results reveal an interdomain cis interaction that is stabilized by a conserved, negatively charged pocket of the globular domain. Interestingly, this interaction surface overlaps an epitope recognized by the POM1 antibody, the binding of which drives rapid cerebellar degeneration mediated by the PrP N-terminus. The resulting structure suggests that the globular domain regulates the N-terminal domain by binding the Cu2+-occupied OR within a complementary pocket.