An approach based on time-domain nuclear magnetic resonance (TD-NMR) enables the estimation of the molecular properties of fatty acid mixtures-kinematic viscosity (µ), heating value (δ), cetane number (CN), and carbon chain length (CL). In this approach, the 1 H NMR spin-spin relaxation rates R 2 or times T 2 were used to determine these molecular properties. Online monitoring of the µ, δ, CN, and CL of fatty acid mixtures was performed using an online TD-NMR system that had been modified for flowing samples. The presented results show the potential of TD-NMR for online quality control during the production of liquid fuels.