Onion is one of the most popular vegetables that play a major role in boosting immunity against diseases. As a result of the successive population increase, many farmers resort to excessive use of chemical plant growth enhancers to increase the crop's productivity, which causes many health and environmental problems and reduces the sustainability of the soil. Microbial phytohormones and vitamins are safe, eco-friendly, and effective natural solutions to increase the crop's productivity and maintain the soil health at the same time. To our knowledge, until know there is no information about the roles of microbial gibberellic acid (GA3), and vitamins on the growth and quality traits of onions. Two field experiments were conducted during two consecutive winter seasons in a sandy calcareous soil farm. Two treatments were in the main plot (without and with microbial GA3), and six were in the sub-plot (control, chemical thiamine, ascorbic acid, riboflavin, and microbial ascorbic acid and riboflavin). Plant growth parameters including plant height, fresh weight, leaf number, bulb diameter, and neck diameter were recorded. Onion yield and their quality traits of sugar content, protein, antioxidants, vitamin C, phenols, flavonoids, and NPK were measured. The major findings revealed that plants treated with applications of microbial GA3 or vitamin treatments significantly improved the onion yield, phenotypic, physiological, and biochemical characteristics in both seasons. In the majority of the measured parameters, the microbial ascorbic acid treatment outperformed the other vitamin treatments. The combination of foliar microbial GA3 spray and vitamins, especially microbial ascorbic acid, and microbial riboflavin, produced the high onion yield, growth and quality traits of plant height, number of leaves, fresh weights, bulb diameter, sugar content, vitamin C, total antioxidants, total phenols, and flavonoids during both seasons. The application of microbial GA3 in combination with microbial vitamins as foliar spraying are promising eco-friendly, cheap, plant bio-stimulators that could be used safely in the field, especially under low-fertility soil, for good growth, yield, and high-quality onions.