The kidneys are commonly affected in immune-complex (IC) deposition diseases, and the complement system is well-established as an important downstream mediator of injury in this setting. More recently, it has also been shown that the glomerulus is the prime target of dysregulated alternative pathway (AP) activation. In particular, AP activation is the key driver of two severe kidney diseases: atypical hemolytic uremic syndrome (aHUS) and C3 glomerulopathy (C3G). 1Both conditions are associated with a variety of predisposing molecular defects in AP regulation, such as genetic variants in complement regulators, autoantibodies that target-specific AP proteins (such as factor H, FH), or autoantibodies that stabilize AP convertases ("nephritic factors," or Nefs). [2][3][4][5] It is noteworthy, however, that while these are systemic AP defects, pathologic complement activation in both diseases principally affects the kidneys. In particular, AP activation primarily targets the glomerular capillaries. 6 This tropism of AP-mediated inflammation for the glomerulus points to a unique interaction between AP proteins and this anatomic structure.A related observation is that many kidney diseases, of widely different etiologies, are associated with secondary AP activation. Kidney diseases in which the AP has been implicated include IC-mediated diseases, 7 antineutrophil cytoplasmic antibody (ANCA) vasculitis, 8 glomerulosclerosis, 9 ischemic acute kidney injury, 10,11 and polycystic kidney disease. 12 Although the mechanisms of activation vary among these conditions, the common involvement of the AP in so many disparate kidney diseases suggests that structural and/or biochemical characteristics render this organ particularly susceptible to AP dysregulation.