<p>Information on the distribution of soil properties is important to know the status of nutrients in the soils based on which fertilizer nutrients are recommended. Given the variability of nutrients in the soils, making a site-specific fertilizer recommendation seems to be a compelling work. To determine the spatial variability of soil nutrients and to make judicious and precise fertilizer recommendations, new measures are designed with this study. These measures are tested against the soil samples (n = 43) for total nitrogen (N), organic matter (OM), phosphorus (P2O5), and potassium (K2O) in the study area. The descriptive statistical analysis indicated an average of low nitrogen and organic matter, while phosphorus was found to be very high and the level of potassium was high. The spread of nutrients across the data sets, however, included low, medium, high, and very high levels of ratings. The Deviation Square Index was developed and applied for the variability measurement and found that the largest variation was with phosphorus distribution, followed by potassium, nitrogen, and organic matter. The coefficient of variation (CV%) analysis also exhibited similar trends in nutrient distributions. Nitrogen was the main determinant explaining the variations in rice yield, while phosphorus and potash were negatively related to the yield. An index of fertilizer nutrient recommendation called Test-Value Specific Dose (TVSD) was developed and used to calculate the nutrient recommendation for each sampled location. This new method gave easy and more accurate doses of fertilizer over the blanket recommendation to fit the variations across the soil samples.</p>