More than one third of the world's population (about 2 billion people) live in malaria-endemic areas, and 1 billion people are estimated to carry parasites at any one time.
1)Malaria, caused by protozoa of the genus Plasmodium, remains one of the most dreadful infectious diseases worldwide killing more than 1 million people per year.2,3) Lack of an effective vaccination and the spread of drug resistance necessitate the development of new drug targets. In the development of antimalarial drugs, it may be suitable to select targets from pathways present in the parasite but absent in humans. Nevertheless, even if a target was common to both parasite and host, slight structural differences could enhance the optimization of a new drug.
4)Thymidylate kinase (TMK, ATP : TMP phosphotransferase, dTMP kinase, deoxythymidine monophosphate kinase, EC 2.7.4.9) belongs to the nucleoside monophosphate kinase super-family and is critical for the synthesis of thymidine triphosphate (TTP). It catalyzes the reversible phosphorylation of TMP to its diphosphate form, thymidine diphosphate, in the presence of the divalent cation Mg 2Ϫ with ATP as the preferred phosphate donor.Recently, we have reported that Plasmodium falciparum thymidylate kinase (PfTMK) is a promising chemotherapeutic target as it can tolerate a range of substrates, which distinguishes it from other TMKs. [5][6][7][8] Compared with the human enzyme, PfTMK shows a broader spectrum of substrate specificity. The enzyme not only phosphorylates the pyrimidine nucleosides dTMP and dUMP, but can also tolerate the bulkier purines. PfTMK can utilize deoxyguanylate (dGMP), guanylate (GMP) and deoxyinosine monophosphate (dIMP). In our previous work, we clarified the dual purine and pyrimidine nucleoside monophosphate (NMP) kinase activity of PfTMK; based on catalytic, mutational, inhibitory, and nucleotide binding properties by isothermal titration calorimetry. Binding studies revealed that the binding affinity of both purine and pyrimidine substrates was highly comparable. Furthermore, PfTMK can be inhibited by both purine and pyrimidine nucleosides, raising the possibility of developing selective inhibitors against PfTMK. TMPK is important in nucleic acids synthesis because of the synthesis of thymidine triphosphate. Furthermore, targeting PfTMK is suspected to not only inhibit pyrimidine synthesis, but also can affect deoxyguanylate nucleotides synthesis.Thermodynamic parameters associated with ligand binding are essential for a systematic evaluation of the binding of ligands with various affinities to a protein. An important step in drug discovery is the mapping of interactions of different substrates at their common active site. The thermodynamic parameters measured during the substrate binding or during competition with another ligand provide a good starting point of new compound design. In the cell, PfTMK is exposed to both substrates at the same time. In the present study, we examined the competitive binding affinity of PfTMK if exposed to an equimolar mixture of both ...