Proteins denature not only at high, but also at low temperature as well as high pressure. These denatured states are not easily accessible for experiment, because usually heat denaturation causes aggregation, whereas cold or pressure denaturation occurs at temperatures well below the freezing point of water or pressures above 5 kbar, respectively. Here we have obtained atomic details of the pressure-assisted, cold-denatured state of ubiquitin at 2,500 bar and 258 K by high-resolution NMR techniques. Under these conditions, a folded, native-like and a disordered state exist in slow exchange. Secondary chemical shifts show that the disordered state has structural propensities for a native-like N-terminal β-hairpin and α-helix and a nonnative C-terminal α-helix. These propensities are very similar to the previously described alcohol-denatured (A-)state. Similar to the A-state,
15N relaxation data indicate that the secondary structure elements move as independent segments. The close similarity of pressure-assisted, cold-denatured, and alcohol-denatured states with native and nonnative secondary elements supports a hierarchical mechanism of folding and supports the notion that similar to alcohol, pressure and cold reduce the hydrophobic effect. Indeed, at nondenaturing concentrations of methanol, a complete transition from the native to the A-state can be achieved at ambient temperature by varying the pressure from 1 to 2,500 bar. The methanol-assisted pressure transition is completely reversible and can also be induced in protein G. This method should allow highly detailed studies of protein-folding transitions in a continuous and reversible manner.protein unfolding | thermodynamics | protein dynamics | heteronuclear NMR I t has long been known that proteins unfold not only at high temperatures, but also at high pressures (1) as well as low temperatures (2). The so-called heat, pressure, and cold denaturations can be described in a unified way by Hawley's theory (1,3). This theory assumes a simplified two-state model of protein unfolding, where the free energy difference between folded and unfolded states is a general parabolic function of temperature and pressure:In Eq. 1 Δ indicates the difference of the respective value between the denatured and the native state; β is the compressibility factor ð∂V =∂ pÞ T ; α is the thermal expansivity factor ð∂V =∂TÞ p ; C p is the heat capacity Tð∂S=∂TÞ p ; and p 0 , T 0 is an arbitrarily chosen reference point. The phase boundary between denatured and native states is then given by the condition ΔG = 0, which corresponds to a tilted ellipse within the pT plane for commonly observed values of Δβ < 0, ΔC p > 0, and Δα > 0. This two-state model is clearly an oversimplification, because both folded and unfolded states can be heterogeneous, and due to the paucity of data it is also unclear whether the heat-, cold-, and pressuredenatured states are identical. Nevertheless the model presents a valuable general framework to pinpoint the main contributing thermodynamic entities, which...