Fourier transform infrared spectroscopic imaging (FTIRI) technique can be used to obtain the quantitative information of content and spatial distribution of principal components in cartilage by combining with chemometrics methods. In this study, FTIRI combining with principal component analysis (PCA) and Fisher's discriminant analysis (FDA) was applied to identify the healthy and osteoarthritic (OA) articular cartilage samples. Ten 10-μm thick sections of canine cartilages were imaged at 6.25μm/pixel in FTIRI. The infrared spectra extracted from the FTIR images were imported into SPSS software for PCA and FDA. Based on the PCA result of 2 principal components, the healthy and OA cartilage samples were effectively discriminated by the FDA with high accuracy of 94% for the initial samples (training set) and cross validation, as well as 86.67% for the prediction group. The study showed that cartilage degeneration became gradually weak with the increase of the depth. FTIRI combined with chemometrics may become an effective method for distinguishing healthy and OA cartilages in future. Madariaga, "Classification and identification of organic binding media in artworks by means of Fourier transform infrared spectroscopy and principal component analysis," Anal. Bioanal. Chem. 399(10), 3601-3611 (2011). 12. E. Ostrovsky, U. Zelig, I. Gusakova, S. Ariad, S. Mordechai, I. Nisky, and J. Kapilushnik, "Detection of cancer using advanced computerized analysis of infrared spectra of peripheral blood," IEEE Trans. Biomed. Eng. 60(2), 343-353 (2013