A domain of locations of a proton in the perovskite structure is determined by studying the local structure and a hard sphere point charge model. Two intra‐ and one inter‐octahedron processes with different energy barriers of ⟨E1⟩, ⟨E2⟩, and ⟨E3⟩ have been studied, respectively. The order of the energy barriers is predicted as ⟨E3⟩ > ⟨E1⟩ ≥ ⟨E2⟩ by studying both the changes of bonding in these processes and the charge imbalance between the acceptor dopant ion and the B type ion. The inter‐octahedron hopping, ⟨E3⟩, is shown to be a necessary and rate limiting step by using percolation and charge imbalance argument. This result differs with earlier calculations, however, it agrees with the result of quasi‐elastic neutron and other experimental results. Through studying the lattice dynamics of a 1D O–H chain and its monomer, we have developed new formulae for a hydrogen bond system and applied them to explain the experimentally observed red‐shift and broadening of the O–H vibration peak. These phenomena are revealed as indications of the quasi‐free state of a proton instead of the formation of hydrogen bond.