The delivery of most therapeutic agents is rendered ineffective for the treatment of brain diseases due to the presence of the blood-brain barrier (BBB). The goal of this study was to investigate the effect of pre-infusion focused ultrasound (FUS) and microbubbles on the distribution of direct brain infusion in vivo. A single-element FUS transducer was used in all sonications, which were carried out immediately prior to direct infusion procedures. Mice received direct infusion of either Gadolinium-labeled albumin (Gd-albumin, 74 kDa) or adeno-associated virus (AAV, $4 MDa). The volumes of Gd-albumin at 30 min were deemed comparable (P ¼ 0.334) between the direct infusion (DI)-only group and the FUS þ DI group. At 120 min, the FUS þ DI group showed significantly higher contrast-enhanced volume (9.76 AE 0.74 mm 3 ) than the DI-only group (7.14 AE 0.34 mm 3 ). For mice infused with AAV, the total volume of transduction was estimated as GFP-positive regions and FUS þ DI group demonstrated significantly higher (P ¼ 0.017) transduction efficiency in vivo. In conclusion, enhanced bio-distribution of directly infused agents was observed when the targeted region was pre-conditioned with FUS and microbubbles. Focused ultrasound has the potential, as an adjuvant technique, to significantly enhance direct brain infusion and achieve the desired therapeutic outcomes.