Medicinal plants possess several metals obtained naturally or through pollution. The study evaluates the genotoxic potentials and the presence of essential elements and toxic heavy metals in Sesbania sesban var. bicolor (leaves), Cyperus compressus (roots) and Asparagus racemosus (roots), which are used as anthelmintics in the traditional medicine of the Santhals in India. Genotoxicity study was performed as per Organization for Economic Co-operation and Development (OECD) guidelines in rats. Element contents were evaluated using inductively coupled plasma-optical emission spectrometry (ICP-OES). Administration of S. sesban var. bicolor (400 mg/kg), C. compressus (700 mg/kg) and A. racemosus (500 mg/kg) did not cause any abnormalities in the chromosomes. Elemental analysis revealed the presence of lead (5.00 ± 0.05, 4.98 ± 0.01, 4.99 ± 0.07 ppm), cadmium (4.99 ± 0.04, 4.90 ± 0.03, 5.00 ± 0.08 ppm) and arsenic (0.98 ± 0.03, 0.41 ± 0.05, 0.92 ± 0.03 ppm), respectively. Although genotoxic potentials were lacking, the presence of toxic heavy metals in them is a cause of concern.