2003
DOI: 10.1373/49.8.1398
|View full text |Cite
|
Sign up to set email alerts
|

Quantitative Evaluation of Alternative Promoter Usage and 3′ Splice Variants for Parathyroid Hormone-related Protein by Real-Time Reverse Transcription-PCR

Help me understand this report

Search citation statements

Order By: Relevance

Paper Sections

Select...
2
1
1
1

Citation Types

1
24
0
1

Year Published

2005
2005
2023
2023

Publication Types

Select...
4
4

Relationship

0
8

Authors

Journals

citations
Cited by 31 publications
(26 citation statements)
references
References 28 publications
1
24
0
1
Order By: Relevance
“…Quantitative evaluation of HTLV-1 tax/rex and PTHrP mRNA expression and alternative promoter usage was performed as previously described. 22 RT reactions were carried out with 5 mg of total RNA according to the manufacturer's protocol using oligo(dT) [12][13][14][15][16][17][18] and 50 U of Superscript II reverse transcriptase (Invitrogen) and were diluted to 50 ml after RT. cDNA standards were prepared by PCR amplification of cDNA from human lung carcinoma cells BEN (PTHrP and b2-microglobulin) or MT-2 cells (tax/rex standards) and calibrators ranging from 250 to 2.5 Â 10 8 copies/ml were prepared by serial dilution.…”
Section: Real-time Rt-pcrmentioning
confidence: 99%
See 1 more Smart Citation
“…Quantitative evaluation of HTLV-1 tax/rex and PTHrP mRNA expression and alternative promoter usage was performed as previously described. 22 RT reactions were carried out with 5 mg of total RNA according to the manufacturer's protocol using oligo(dT) [12][13][14][15][16][17][18] and 50 U of Superscript II reverse transcriptase (Invitrogen) and were diluted to 50 ml after RT. cDNA standards were prepared by PCR amplification of cDNA from human lung carcinoma cells BEN (PTHrP and b2-microglobulin) or MT-2 cells (tax/rex standards) and calibrators ranging from 250 to 2.5 Â 10 8 copies/ml were prepared by serial dilution.…”
Section: Real-time Rt-pcrmentioning
confidence: 99%
“…P1 and P3 contain a typical TATA box, [16][17][18] while P2 is a GC-rich promoter region. 19 Previous evaluation of PTHrP alternative promoter usage by qualitative 20,21 and quantitative reverse transcription (RT)-PCR 22 revealed that P3-initiated transcripts were detectable at high levels in most tumors and cell lines examined, including the (HTLV-1)-positive cell line MT-2, whereas P1 or P2-derived transcripts were not detected or expressed only in a subset of tumors.…”
Section: Introductionmentioning
confidence: 99%
“…38 We identified two putative NF-kB-binding sequences in the human PTHrP P2 promoter that are located 1558 (kB2) and 152 (kB1) nucleotides upstream from the transcription initiation start site. Vasavada et al 39 have shown that the SmaI/Sau3A fragment of the P2 promoter had significant activity in renal carcinoma cells.…”
Section: Discussionmentioning
confidence: 99%
“…Several studies have shown that P2/P3 promoter usage is prevalent in many cancers such as breast cancer and bone cancer in addition to HTLV-1-positive and ATLL cells. [8][9][10][11] Furthermore, Brandt et al 12 reported a preferential usage of P2 over P1 and P3 promoters in different cancer cell lines examined. Although this stimulation and activity of the PTHrP P2 promoter was identified 10 years ago, little is known regarding the transcriptional mechanisms involving cis-acting regulatory sequences within this promoter.…”
Section: Introductionmentioning
confidence: 99%
“…P1 and P3 are canonical TATA promoters (Mangin et al, 1990;Campos et al, 1992;Suva et al, 1989) and initiate transcription at exons 1 and 4 respectively, while P2 is a GC-rich promoter that initiates transcription upstream of exon IC (Vasavada et al, 1993). Evaluation of PTHrP alternative promoter usage by qualitative (Southby et al, 1995 and and quantitative reverse transcription RT-PCR (Bouizar et al, 1999;Richard et al, 2003) revealed high concentrations of P3-initiated transcripts in most tumors, including breast cancers (Bouizar et al, 1999) and many tumor cell lines (Cataisson et al, 2003). The amino acid sequences encoded by only two of the 9 exons in the human gene are present in all transcripts.…”
Section: Gene Structurementioning
confidence: 99%