We performed magnetic and GPR measurements to image the buried ruins of the Middle Age abbey San Pietro in Crapolla, on the Sorrento‐Amalfi Coast (Massa Lubrense, Southern Italy). The site represents an important religious location, which is nowadays partially buried along the cliff. An integrated study was necessary to map the buried structures and address the archaeological excavation. For this reason, we carried out the surveys on two main grids in order to reconstruct the structures of the abbey and of its related church. The magnetic data were filtered through the discrete wavelet transform (DWT) and then transformed to total gradient maps. The obtained maps were interpreted with depth from extreme points (DEXP) imaging method to assess the horizontal and depth positions of the top. The GPR data were processed and time‐depth converted. Results from the integrated interpretation of these data suggest the possible presence of different vaulted rooms and an elongated structure at 0.3‐m depth from ground surface. This latter is interpretable in terms of perimetral and internal walls of the abbey and its church. These outcomes were crucial to successfully address archaeological excavations, which targeted one of the modelled areas and unearthed a wall at the predicted depths.