“…Nonetheless, much effort is being put into novel reconstruction algorithms which can notably improve the quality of tomograms, even with low sampling and limited angular range, using either the discretisation of intensities, the calculation of sinusoidal trajectories in sinograms, the incorporation of geometric prior knowledge, or compressive sensing [27][28][29][30][31]. Tomograms obtained after the reconstruction are 3D datasets containing a continuous range of intensity levels, and therefore in order to extract useful information, visualisation and segmentation are required in combination with the application of sophisticated algorithms, such as anisotropic non-linear diffusion, to reduce noise and enhance local structure without worsening the resolution or structural information, adaptive thresholding, or equalisation in real space [32][33][34][35]. In the present work, we focus on the effects of an experimental parameter: the minimum value of the intensity used to acquire a tomographic tilt series.…”