Branched polyethylenimine, (b PEI, 25 kDa), was converted into nanoparticles by using three di®erent crosslinkers, 1,6-hexanebisphosphate (HP), adipic acid (AA), and 1,4-butane dialdehyde (BA), having same carbon chain length (C-6), and the e®ect of ionic and covalent crosslinking on the transfection e±ciency was studied. The synthesized nanoparticles were characterized by 1 H-NMR, IR, DLS, AFM, and TEM. The entire series of nanoparticles was tested for their toxicity and ability to deliver genes in COS-1 and CHO cell lines. It was observed that, AAP-3 nanoparticle/DNA complex exhibited highest transfection e±ciency ($2.1À10.7 folds) than the native PEI and commercially available transfection reagents, such as Gene-PORTER 2 TM , Lipofectamine TM , and Superfect TM , with cell viability >80%. Among the series, the highest cell viability was observed with BAP nanoparticles (>96%). These nanoparticles were able to deliver GFP-siRNA very e±ciently inside the cells with $76%À90% suppression of EGFP expression. Cellular tra±cking studies showed that these nanoparticles carry pDNA inside the nucleus of the cells within 2 h of the addition to the cells.