[1] The advance and retreat of sea ice produces seasonal convection and stratification, dampens surface waves and creates a separation between the ocean and atmosphere. These are all phenomena that can affect the air-sea gas transfer velocity (k 660 ), and therefore it is not straightforward to determine how sea ice cover modulates air-sea flux. In this study we use field estimates k 660 to examine how sea ice affects the net gas flux between the ocean and atmosphere. An inventory of salinity, 3 He, and CFC-11 in the mixed layer is used to infer k 660 during the drift of Ice Station Weddell in 1992. The average of k 660 is 0.11 m d −1 across nearly 100% ice cover. In comparison, the only prior field estimates of k 660 are disproportionately larger, with average values of 2.4 m d −1 across 90% sea ice cover, and 3.2 m d −1 across approximately 70% sea ice cover. We use these values to formulate two scenarios for the modulation of k 660 by the fraction of sea ice cover in a 1-D transport model for the Southern Ocean seasonal ice zone. Results show the net CO 2 flux through sea ice cover represents 14-46% of the net annual air-sea flux, depending on the relationship between sea ice cover and k 660 . The model also indicates that as much as 68% of net annual CO 2 flux in the sea ice zone occurs in the springtime marginal ice zone, which demonstrates the need for accurate parameterizations of gas flux and primary productivity under partially ice-covered conditions. Citation: Loose, B., and P. Schlosser (2011), Sea ice and its effect on CO 2 flux between the atmosphere and the Southern Ocean interior,