DNA replication in eukaryotic organisms is semiconservative (1), initiating at discontinuous foci (2) and terminating in a temporal sequence characteristic of the location of the DNA segment in metaphase chromosomes (3). Biochemical and cytological studies have correlated late DNA replication with both genetic inactivity and the persistence of chromosome condensation throughout most of the cell cycle (4, 5). Regions with these properties are termed heterochromatic and have been shown to correspond to regions of metaphase chromosomes staining intensely either with quinacrine or quinacrine mustard, or with Giemsa mixtures after any of a variety of pretreatments (6, 7). However, previous correlation of late DNA replication with banded regions of metaphase chromosomes has been limited by the resolution usually realized of the autoradiographic techniques used, and the chromosomebanding stains do not effectively differentiate the facultative heterochromatic X chromosome from its active homologue. More precise correlation of DNA replication with chromosome location in individual metaphases could be achieved were it possible to detect DNA synthesis at the level of resolution of optical techniques.Direct light-microscopic visualization of DNA replication might use DNA base analogues with distinctive absorptive or fluorescent properties. However, available base analogues do not, at present, make such an approach practical. As ai alternative method, one might use an indirect phenomenon, Abbreviation: Hepes, N-2-hydroxyethylpiperazine-N'-2-ethanesulfonic acid. Address reprint requests to author at: Children's Hospital Medical Center, 300 Longwood Ave., Boston, Mass. 02115. 3395 such as the environmental sensitivity of fluorescent chromosome stains, using them to report the incorporation of nucleotide analogues containing substituents, such as heavy atoms (8), perturbing dye luminescence.Towards this purpose, we have examined several dyes, including the compound 33258 Hoechst [2-[2-(4-hydroxyphenyl)-6-benzimidazolyl]-6-(1-methyl4-piperazyl)-benzimidazol * 3 HClJ, which has previously been used to demonstrate constitutive heterochromatin in rodent metaphase chromosomes (9). We observed that the fluorescence of a sample of 33258 Hoechst, kindly supplied by Dr. H. Loewe, Hoechst, is much less efficient when the dye is bound to poly(dA-BrdU) than when bound to poly(dA-dT). This paper introduces a method based on this observation. Reduction in the fluorescence intensity of 33258 Hoechst bound to chromatin, upon incorporation of BrdU, has been used to follow DNA synthesis in interphase nuclei and metaphase chromosomes.
MATERIALS AND METHODSCell Growth. Peripheral human leukocytes were cultured in Eagle's minimal essential medium (MBA) with 2 mM Lglutamine and 20% fetal-calf serum (GIBCO), to which crude phytohemagglutinin was added. BrdU and thymidine, added to cultures grown at 370, as described in the figure legends, were obtained from Sigma and their tritiated derivatives from New England Nuclear Corp. Uridine was also obt...