The a subunit from the Rhodospirillum rubrum F 0 F 1 ATP synthase (RrF 1 a) was over-expressed in unc operondeleted Escherichia coli strains under various growth conditions only in insoluble inclusion bodies. The functional refolding of urea-solubilized RrF 1 a was followed by measuring its ability to stimulate the restoration of ATP synthesis and hydrolysis in b-less R. rubrum chromatophores reconstituted with pure native or recombinant RrF 1 b [Nathanson, L. & Gromet-Elhanan, Z. (1998) J. Biol. Chem. 273, 10933±10938]. The refolding efficiency was found to increase with decreasing RrF 1 a concentrations and required high concentrations of MgATP, saturating <60% when 50 mg protein´mL 21 were refolded in presence of 50 mm MgATP. Size-exclusion HPLC of such refolded RrF 1 a revealed a 50±60% decrease in its aggregated form and a parallel appearance of its monomeric peak. RrF 1 b refolded under identical conditions appeared almost exclusively as a monomer. This procedure enabled the isolation of large amounts of a stable RrF 1 a monomer, which stimulated the restoration of ATP synthesis and hydrolysis much more efficiently than the refolded a mixture, and bound ATP and ADP in a Mg-dependent manner. Incubation of both RrF 1 a and b monomers, which by themselves had no ATPase activity, resulted in a parallel appearance of activity and assembled a 1 b 1 -dimers, but showed no formation of a 3 b 3 -hexamers. The RrF 1 -a 1 b 1 -ATPase activity was, however, very similar to the activity observed in isolated native chloroplast CF 1 -a 3 b 3 , indicating that these dimers contain only the catalytic nucleotide-binding site at their a/b interface. Their inability to associate into an a 3 b 3 -hexamer seems therefore to reflect a much lower stability of the noncatalytic RrF 1 a/b interface.Keywords: assembly of active a 1 b 1 -dimers; ATP synthase; F 1 -ATPase; refolding of functional a and b monomers; Rhodospirillum rubrum. The F 0 F 1 H + ATP synthase, widely distributed and highly conserved in mitochondria, chloroplasts and bacteria, plays a central role in the energy transduction process in all living organisms. This enzyme catalyzes ATP synthesis from ADP and inorganic phosphate using energy derived from the transmembrane proton electrochemical gradient generated by respiratory or photosynthetic electron flow. The F 1 , an extrinsic membrane protein complex, is the catalytic sector which acts as a soluble ATPase when detached from the membrane. It is composed of five subunits with a stoichiometry of a 3 b 3 g d 1, and contains six nucleotide-inding sites located at a/b interfaces. Three of these sites are catalytic residing predominantly on the b subunits and three noncatalytic sites are mainly on the a subunits [1±5].Recently, the crystal structures of bovine heart [6] and rat liver [7] mitochondrial F 1 (MF 1 ) as well as the thermophilic Bacillus PS3 F 1 (TF 1 )-a 3 b 3 subcomplex [8] have been resolved. The bovine heart structure at 2.8 A Ê resolution [6] shows a clear difference in bound nucleotides among the cata...