2023
DOI: 10.1021/acssynbio.3c00516
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Reconstruction of a Genome-Scale Metabolic Model of Scenedesmus obliquus and Its Application for Lipid Production under Three Trophic Modes

Ayusmita Ray,
Pritam Kundu,
Amit Ghosh

Abstract: Green microalgae have emerged as beneficial feedstocks for biofuel production. A systems-level understanding of the biochemical network is needed to harness the microalgal metabolic capacity for bioproduction. Genome-scale metabolic modeling (GEM) showed immense potential in rational metabolic engineering, utilizing biochemical flux distribution analysis. Here, we report the first GEM for the green microalga, Scenedesmus obliquus (iAR632), a promising biodiesel feedstock with high lipid-storing capability. iAR… Show more

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Cited by 8 publications
(4 citation statements)
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References 80 publications
(145 reference statements)
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“…This iAR632 comprised 1467 reactions, 734 metabolites, and 632 genes. Predictions and experimental observations indicate that these genes exhibit a 3.8-fold increase in biomass and almost 4-fold higher lipid content under mixotrophic conditions compared to other trophic modes [51]. Therefore, S. Obliquus is a suitable candidate for PW treatment as it can grow in a mixotrophic environment and reduce TOC as proven in the ndings of this study.…”
Section: Total Organic Carbon (Toc) Removalsupporting
confidence: 56%
“…This iAR632 comprised 1467 reactions, 734 metabolites, and 632 genes. Predictions and experimental observations indicate that these genes exhibit a 3.8-fold increase in biomass and almost 4-fold higher lipid content under mixotrophic conditions compared to other trophic modes [51]. Therefore, S. Obliquus is a suitable candidate for PW treatment as it can grow in a mixotrophic environment and reduce TOC as proven in the ndings of this study.…”
Section: Total Organic Carbon (Toc) Removalsupporting
confidence: 56%
“…S. obliquus (iAR632) has recently been studied for its biosynthetic pathways, revealing that this strain comprises 1467 reactions, 734 metabolites, and 632 genes. Predictions and experimental observations indicated a 3.8-fold increase in biomass and almost 4-fold higher lipid content under mixotrophic conditions than other trophic modes (Ray et al 2023 ).…”
Section: Resultsmentioning
confidence: 97%
“…Various environmental conditions, such as the availability of nutrients, may trigger the accumulation of lipids in microalgae. This serves as a means of storing energy for future use after the stress has subsided [25].…”
Section: Discussionmentioning
confidence: 99%