Despite long-standing interest, the molecular mechanisms underlying the establishment of anterior-posterior (AP) polarity remain among the unsolved mysteries in metazoans. In the planarians (a family of flatworms), canonical Wnt/-catenin signaling is required for posterior specification, as it is in many animals. However, the molecular mechanisms regulating the posterior-specific induction of Wnt genes according to the AP polarity have remained unclear. Here, we demonstrate that Hedgehog (Hh) signaling is responsible for the establishment of AP polarity via its regulation of the transcription of Wnt family genes during planarian regeneration. We found that RNAi gene knockdown of Dugesia japonica patched (Djptc) caused ectopic tail formation in the anterior blastema of body fragments, resulting in bipolar-tails regeneration. In contrast, RNAi of hedgehog (Djhh) and gli (Djgli) caused bipolar-heads regeneration. We show that Patched-mediated Hh signaling was crucial for posterior specification, which is established by regulating the transcription of Wnt genes via downstream Gli activity. Moreover, differentiated cells were responsible for the posterior specification of undifferentiated stem cells through Wnt/-catenin signaling. Surprisingly, Djhh was expressed in neural cells all along the ventral nerve cords (along the AP axis), but not in the posterior blastema of body fragments, where the expression of Wnt genes was induced for posteriorization. We therefore propose that Hh signals direct head or tail regeneration according to the AP polarity, which is established by Hh signaling activity along the body's preexisting nervous system. body polarity ͉ regeneration ͉ anteroposterior axis ͉ neuron ͉ stem P lanarians are one of the most useful animals for investigation of the molecular and cellular mechanisms by which the anteriorposterior (AP) polarity of the body is established during regeneration. It is well known that planarians regenerate a head or a tail from the anterior and posterior ends, respectively, of the amputated stump, with maintenance of the original AP polarity. More than a century ago, T.H. Morgan reported one of the earliest descriptions of ''polarity'' in planarian regeneration (1), based on his findings that very thin cross-sectional fragments made by cutting along the AP axis regenerated bipolar two-headed planarians (2), termed ''Janus-heads'' (an allusion to the Roman god Janus; 3, 4). Since then, much effort has been focused on this fascinating maintenance of the original polarity, and its disruption, such as the induction of Janus-heads formation by treatment with colchicine or colcemid (5, 6), although the molecular mechanisms still remain unknown.Recently, canonical Wnt/-catenin signaling was shown to be required for posterior specification in planarians. Wnt/-catenin signaling is evolutionarily well conserved and plays a role in establishing the AP axis during development in several animal species. In the planarian Schmidtea mediterranea, gene knockdown by RNA interference (RNAi) of ...