Background: Meligethes are pollen-beetles associated with flowers of Rosaceae as larvae. This genus, in its present-day concept, consists of 63 known species in two subgenera, Meligethes and Odonthogethes, predominantly occurring in the eastern Palaearctic. We analyzed 61 morphological and ecological characters (128 states) of all species, as well as of 7 outgroup species from 7 Meligethinae genera (including the believed sister-genus Brassicogethes), to investigate their phylogeny. A parallel molecular analysis was carried out on 9 Meligethes, 9 Odonthogethes, 3 Brassicogethes and 2 Meligethinus species, based on DNA sequence data from mitochondrial (COI, 16S) and nuclear (CAD) genes, to obtain additional phylogenetic information on the group. Results: Morphological phylogenetic reconstructions supported the monophyly of the genus, and clades corresponding to purported subgenera Meligethes and Odonthogethes. Main species-groups were mostly recovered intact, however some unresolved polytomies remained. Molecular data suggested a different scenario, placing members of Brassicogethes (including 42 mostly W Palearctic species associated with Brassicaceae) as sister to Odonthogethes, with this clade being sister to Meligethes s.str. This alternative phylogenetic assessment suggests that the monophyletic clades Meligethes s.str., Odonthogethes and Brassicogethes should be regarded alternatively as three subgenera of a monophyletic Meligethes, or three genera in a monophyletic genus-complex, with mutually monophyletic Brassicogethes and Odonthogethes. Molecular analyses estimated the origin of this lineage at ca. 14-15 Mya from a common stem including Meligethinus. Conclusions: We hypothesize in the Middle Miocene (likely in Langhian Age), the first Meligethes specialized on Rosaceae, on which they subsequently radiated during Late Miocene and Plio-Pleistocene. This radiation was enforced by geographic isolation in E Asiatic mountain systems, and by larval host-plant specialization. Combined evidence from morphology, ancestral state parsimony reconstruction of host-plant associations, and molecular evidence, suggested that for Meligethes s.str., Rosoideae (Rosa spp.) represented the ancestral hosts, followed by an independent shift of ancestral Odonthogethes (ca. 9-15 Mya) on Rubus (Rosoideae) and members of Rosaceae Spiraeoideae. Other ancestral Odonthogethes probably shifted again on the unrelated plant family Brassicaceae (maybe 8-14 Mya in S China), allowing a rapid westward radiation of the Brassicogethes clade.