The general trends in the construction of highly active electrode devices are focused on the science of materials. These are useful for developing 2D nanostructured electrodes, with well-defined active sites, which are excellent approaches for understanding the fundamentals of electrocatalytic reactions. Here we present an overview of the experimental self-assembled molecular catalyst configurations to develop excellent electrode materials containing molecular catalysts for energy conversion device applications. First, by applying well-known reactivity descriptors for electrocatalysis, nanoarchitectonics, and the self-assembled concept, we summarize the main molecular building blocks to achieve a technology system for arranging by a rational design, nanoscale structural units configuration that promotes electrocatalytic reactions such as oxygen reaction reduction (ORR) and water-splitting reactions. We focus the discussion on the MN4 molecular catalyst linked to electrode surfaces with the help of the axial blocks, bio-inspired self-assembled approaches such as biomimetic models of metalloenzymes active sites, and molybdenum sulfide clusters for hydrogen evolution reaction (HER). We briefly discuss the advantages of developing host-guest self-assembled molecular catalyst systems based on cyclodextrins anchored to electrodes to get well-defined active sites with local environment control.