Genomic data combined with reverse genetic approaches have contributed to the characterization of major virulence factors of Vibrio species; however, these studies have targeted primarily human pathogens. Here, we investigate virulence factors in the oyster pathogen Vibrio splendidus LGP32 and show that toxicity is correlated to the presence of a metalloprotease and its corresponding vsm gene. Comparative genomics showed that an avirulent strain closely related to LGP32 lacked the metalloprotease. The toxicity of LGP32 metalloprotease was confirmed by exposing mollusk and mouse fibroblastic cell lines to extracellular products (ECPs) of the wild type (wt) and a vsm deletion mutant (⌬vsm mutant). The ECPs of the wt induced a strong cytopathic effect whose severity was cell type dependent, while those of the ⌬vsm mutant were much less toxic, and exposure to purified protein demonstrated the direct toxicity of the Vsm metalloprotease. Finally, to investigate Vsm molecular targets, a proteomic analysis of the ECPs of both LGP32 and the ⌬vsm mutant was performed, revealing a number of differentially expressed and/or processed proteins. One of these, the VSA1062 metalloprotease, was found to have significant identity to the immune inhibitor A precursor, a virulence factor of Bacillus thuringiensis. Deletion mutants corresponding to several of the major proteins were constructed by allelic exchange, and the ECPs of these mutants proved to be toxic to both cell cultures and animals. Taken together, these data demonstrate that Vsm is the major toxicity factor in the ECPs of V. splendidus.Vibrionaceae are a predominant family of gram-negative bacteria found in aquatic environments (30). Bacteria within this family demonstrate a high degree of genetic diversity and are able to colonize very different types of niches. They live freely as planktonic forms in the water column or are associated in biofilms or with host organisms as pathogenic, commensal, or mutualistic bacteria. To date, eight genome sequences from Vibrionaceae have been made available: those of Vibrio cholerae strains N16961 and 0395, V. parahaemolyticus RIMD2210633, V. vulnificus strains YJ016 and CMCP6, V. fischeri ES114, V. harveyi ATCC BAA-1116, and Photobacterium profundum SS9 (3,10,19,24,32). More recently, we have completed the sequencing of the genome of V. splendidus strain LGP32, an oyster (Crassostrea gigas) pathogen