The interaction of host molecules with water molecules is of primary importance in astrophysical and atmospheric studies. Water-binding interactions continue to attract a broad interest in various fields, especially those related to the formation of assembly structures. Using the physical vapor deposition (PVD) method and a two-beam interferometer with a wavelength of 406 nm, the refractive indices of thin films of a water and nitrogen (argon) mixture were calculated in the range from 15 to 35 K. The results of temperature transformations of the obtained films from a two-beam interferometer, and thermal desorption characteristics from the temperature of condensation to the temperature of evaporation of water (15–180 K), are presented. The relationship between the signal of the interferometer, the refractive index, and the film thickness during glass transition is demonstrated.