Crocus sativus
stigmas are the main source of crocins, which are glucosylated apocarotenoids derived from zeaxanthin cleavage that give saffron its red color. Phytoene synthase (PSY) mediates the first committed step in carotenoid biosynthesis in plants. Four
PSY
genes encoding functional enzymes were isolated from saffron. All the proteins were localized in plastids, but the expression patterns of each gene,
CsPSY1a
,
CsPSY1b
,
CsPSY2
, and
CsPSY3
, in different saffron tissues and during the development of the stigma showed different tissue specialization. The
CsPSY2
transcript was primarily detected in the stigmas where it activates and stimulates the accumulation of crocins, while its expression was very low in other tissues. In contrast,
CsPSY1a
and
CsPSY1b
were mainly expressed in the leaves, but only
CsPSY1b
showed stress-light regulation. Interestingly,
CsPSY1b
showed differential expression of two alternative splice variants, which differ in the intron retention at their 5′ UTRs, resulting in a reduction in their expression levels. In addition, the
CsPSY1a
and
CsPSY1b
transcripts, together with the
CsPSY3
transcript, were induced in roots under different stress conditions. The
CsPSY3
expression was high in the root tip, and its expression was associated with mycorrhizal colonization and strigolactone production. CsPSY3 formed a separate branch to the stress-specific Poaceae homologs but was closely related to the dicot PSY3 enzymes.