Regulation of polar flagellum genes is mediated by quorum sensing and FlhDC in Burkholderia glumae

Majerczyk

et al. 2012

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111

169

Acyl-homoserine lactone-mediated quorum sensing (QS) regulates diverse activities in many species of Proteobacteria. QS-controlled genes commonly code for production of secreted or excreted public goods. The acyl-homoserine lactones are synthesized by members of the LuxI signal synthase family and are detected by cognate members of the LuxR family of transcriptional regulators. QS affords a means of population density-dependent gene regulation. Control of public goods via QS provides a fitness benefit. Another potential role for QS is to anticipate overcrowding. As population density increases and stationary phase approaches, QS might induce functions important for existence in stationary phase. Here we provide evidence that in three related species of the genus Burkholderia QS allows individuals to anticipate and survive stationary-phase stress. Survival requires QS-dependent activation of cellular enzymes required for production of excreted oxalate, which serves to counteract ammonia-mediated alkaline toxicity during stationary phase. Our findings provide an example of QS serving as a means to anticipate stationary phase or life at the carrying capacity of a population by activating the expression of cytoplasmic enzymes, altering cellular metabolism, and producing a shared resource or public good, oxalate.Burkholderia carrying capacity | glumae | pseudomallei | thailandensis | cell death A cyl-homoserine lactone (AHL)-mediated quorum sensing (QS) regulates diverse activities, including bioluminescence, biofilm formation, motility, and virulence factor formation, in many Proteobacteria (1-3). AHLs are synthesized most typically by members of the LuxI family signal synthases and detected by members of the LuxR family of transcriptional regulators (1-3). A large body of work has characterized the molecular mechanisms of bacterial QS; demonstrating the population-wide benefits that drive QS-mediated cooperative behavior has proven difficult, however. Cooperative activities benefit individuals within a group (4, 5).QS-controlled genes commonly code for the production of extracellular public goods that can be shared by all members of the group regardless of which members produce them. These extracellular products are often important for nutrient acquisition, interspecies competition, or virulence (6-8). In Pseudomonas aeruginosa, QS control of secreted proteases provides fitness benefits, because the proteases are produced only when they can be used efficiently (9). Other potential roles of QS in bacteria have been proposed, including the hypothesis that QS enables bacteria to anticipate population carrying capacity in a given environment. Anticipation of stationary phase might allow individuals to modify their physiology in preparation for survival at population carrying capacity.Here we address the question of whether QS is involved in anticipation of stationary-phase stress in three closely related bacteria: the rice pathogen Burkholderia glumae, the opportunistic human pathogen Burkholderia pseudomallei, and the...

Section: Methodsmentioning

confidence: 99%

mentioning

confidence: 99%

Bacterial quorum sensing, cooperativity, and anticipation of stationary-phase stress

Majerczyk

et al. 2012

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111

169

“…Compared with other closely related pathogenic bacteria, B. glumae is relatively easy to handle in the laboratory and contains only a single LuxI-R-type QS system, signal synthase (TofI), synthesizing octanoyl-homoserine lactone (C8-HSL), and the cognate receptor TofR (13), making this organism an ideal model for the study of QS in bacteria. C8-HSL binds to TofR, activating expression of an isocitrate lyase regulator R (IclR)-type transcriptional regulator QsmR, which in turn activates a series of genes associated with the production of intra-and extracellular products important for survival in crowded conditions (14)(15)(16).…”

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confidence: 99%

Bacterial quorum sensing and metabolic slowing in a cooperative population

Kim

et al. 2014

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116

Acyl-homoserine lactone (AHL)-mediated quorum sensing (QS) controls the production of numerous intra-and extracellular products across many species of Proteobacteria. Although these cooperative activities are often costly at an individual level, they provide significant benefits to the group. Other potential roles for QS include the restriction of nutrient acquisition and maintenance of metabolic homeostasis of individual cells in a crowded but cooperative population. Under crowded conditions, QS may function to modulate and coordinate nutrient utilization and the homeostatic primary metabolism of individual cells. Here, we show that QS down-regulates glucose uptake, substrate level and oxidative phosphorylation, and de novo nucleotide biosynthesis via the activity of the QS-dependent transcriptional regulator QsmR (quorum sensing master regulator R) in the rice pathogen Burkholderia glumae. Systematic analysis of glucose uptake and core primary metabolite levels showed that QS deficiency perturbed nutrient acquisition, and energy and nucleotide metabolism, of individuals within the group. The QS mutants grew more rapidly than the wild type at the early exponential stage and outcompeted wild-type cells in coculture. Metabolic slowing of individuals in a QS-dependent manner indicates that QS acts as a metabolic brake on individuals when cells begin to mass, implying a mechanism by which AHL-mediated QS might have evolved to ensure homeostasis of the primary metabolism of individuals under crowded conditions. A cyl-homoserine lactone (AHL)-mediated quorum sensing (QS) controls diverse behaviors, including virulence, biofilm formation, and motility, in many Proteobacteria (1-3). Such QSdependent activities are the result of density-dependent expression of both intra-and extracellular gene products important for survival in crowded conditions (4-7). Other roles for bacterial QS have been proposed, including allowing bacteria to control nutrient uptake and maintain individual metabolic homeostasis within a crowded but cooperative population. The metabolic status of bacteria is usually defined as the average metabolic activity of individual cells in a population; however, the concepts of population biology have often been ignored in this context.Little is known regarding whether or not individual cells change their primary metabolism under crowded, but cooperative, conditions or how they maintain metabolic homeostasis at the population level. In addition to the feedback inhibition circuits characteristic of many biochemical processes (8-10), we hypothesized that QS might control both glucose uptake and metabolic homeostasis of individual cells in crowded populations based upon earlier analyses of QS-dependent gene expression in Burkholderia glumae and the role of QS in regulating the respiration of Burkholderia thailandensis (11,12). The model organism used in this study, B. glumae, is an important agricultural pathogen due to its ability to cause rice panicle blight. Compared with other closely related pathogenic bac...

“…In this bacterium, motility, protein secretion, and toxoflavin biosynthesis and transport are controlled by the QS signaling molecule N-octanoyl-L-HSL (C8-HSL). This molecule is synthesized by the acyl-HSL synthase TofI and mediates QS signaling by binding to its cognate receptor, TofR (14)(15)(16).…”

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confidence: 99%

Small-molecule inhibitor binding to an N -acyl-homoserine lactone synthase

Chung

et al. 2011

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103

106

Quorum sensing (QS) controls certain behaviors of bacteria in response to population density. In Gram-negative bacteria, QS is often mediated by N-acyl-L-homoserine lactones (acyl-HSLs). Because QS influences the virulence of many pathogenic bacteria, synthetic inhibitors of acyl-HSL synthases might be useful therapeutically for controlling pathogens. However, rational design of a potent QS antagonist has been thwarted by the lack of information concerning the binding interactions between acyl-HSL synthases and their ligands. In the Gram-negative bacterium Burkholderia glumae, QS controls virulence, motility, and protein secretion and is mediated by the binding of N-octanoyl-L-HSL (C8-HSL) to its cognate receptor, TofR. C8-HSL is synthesized by the acyl-HSL synthase TofI. In this study, we characterized two previously unknown QS inhibitors identified in a focused library of acyl-HSL analogs. Our functional and X-ray crystal structure analyses show that the first inhibitor, J8-C8, binds to TofI, occupying the binding site for the acyl chain of the TofI cognate substrate, acylated acyl-carrier protein.Moreover, the reaction byproduct, 5′-methylthioadenosine, independently binds to the binding site for a second substrate, Sadenosyl-L-methionine. Closer inspection of the mode of J8-C8 binding to TofI provides a likely molecular basis for the various substrate specificities of acyl-HSL synthases. The second inhibitor, E9C-3oxoC6, competitively inhibits C8-HSL binding to TofR. Our analysis of the binding of an inhibitor and a reaction byproduct to an acyl-HSL synthase may facilitate the design of a new class of QS-inhibiting therapeutic agents. Q uorum sensing (QS) is an intercellular signaling process that mediates certain behaviors of bacteria (including bioluminescence, biofilm formation, motility, and virulence factor production) in response to the bacterial cell population density (1-3). In Gram-negative bacteria, QS is often mediated by Nacyl-L-homoserine lactones (acyl-HSLs), which are synthesized by the LuxI family of acyl-HSL synthases from S-adenosyl-Lmethionine (SAM) and acylated acyl-carrier protein (acyl-ACP), with the release of holo-ACP and 5′-methylthioadenosine (MTA) as byproducts (SI Appendix, Fig. S1A) (4, 5). Compounds of the acyl-HSL class share a homoserine lactone ring moiety, but the acyl chains conjugated to the ring via an amide bond vary in length, oxidation state at C3, and amount of saturation (SI Appendix, Fig. S1A). The recent finding that p-coumarate is an alternative substrate for acyl-ACP has extended the known range of possible acyl-HSL substrates (6). On the other hand, the acyl-HSL receptor is a transcriptional regulator that controls the expression of target genes in response to acyl-HSL binding (1-3).Among the hundreds of genes regulated by QS, the most widely studied genes are those related to virulence; these genes are of particular interest because QS disruption is being investigated as a strategy for controlling virulent pathogens (7-9). QS inhibitors can act by suppressing a...