Torsin ATPases are the only representatives of the AAA؉ ATPase family that reside in the lumen of the endoplasmic reticulum (ER) and nuclear envelope. Two of these, TorsinA and TorsinB, are anchored to the ER membrane by virtue of an N-terminal hydrophobic domain. Here we demonstrate that the imposition of ER stress leads to a proteolytic cleavage event that selectively removes the hydrophobic domain from the AAA؉ domain of TorsinA, which retains catalytic activity. Both the pharmacological inhibition profile and the identified cleavage site between two juxtaposed cysteine residues are distinct from those of presently known proteases, suggesting that a hitherto uncharacterized, membrane-associated protease accounts for TorsinA processing. This processing occurs not only in stressexposed cell lines but also in primary cells from distinct organisms including stimulated B cells, indicating that Torsin conversion in response to physiologically relevant stimuli is an evolutionarily conserved process. By establishing 5-nitroisatin as a cell-permeable inhibitor for Torsin processing, we provide the methodological framework for interfering with Torsin processing in a wide range of primary cells without the need for genetic manipulation.The human genome encodes four Torsin ATPases (TorsinA, TorsinB, Torsin 2A, and Torsin3A), all of which are members of the ATPases associated with a variety of cellular activities (AAAϩ) 3 family (1, 2). Of those, TorsinA is the best characterized Torsin ATPase due to its association with the congenital movement disorder DYT1 dystonia (3). TorsinA has been implicated in a variety of cellular processes, including protein quality control and cellular stress responses (4 -9), although its precise mechanistic functions remain to be identified (2, 10). Although Torsins are phylogenetically closely related to Clp/ HSP100 proteins, they are characterized by a number of atypical features (for a recent review, see Refs. 2 and 10). On the primary structural level, these include differences in the Walker A motif responsible for nucleotide binding, as well as the absence of an otherwise conserved arginine residue required for ATP hydrolysis (10).TorsinA is directed to the lumen of the endoplasmic reticulum by a cleavable N-terminal signal sequence, which is followed by a hydrophobic domain responsible for membrane anchoring and ER retention (11). TorsinA is partitioned between the ER and the contiguous perinuclear space of the nuclear envelope, and its localization is controlled in part by its association with LAP1 and LULL1, type II transmembrane proteins residing in the nuclear envelope and ER, respectively (12)(13)(14). Another unusual property of Torsins is that they lack significant basal ATPase activity in isolation and are tightly regulated by LAP1 and LULL1, which integrate into the Torsin ring via AAA-like domains to trigger ATP hydrolysis through an active site complementation mechanism (15-17). Thus, Torsins and their ATPase activating cofactors form a composite, membrane-spanning assembly....