One of the important defects is the oxygen vacancy on metal oxide surfaces, and the defects function as the active sites in different catalytic reactions. Herein, Ru/CeO2-rod and Ru/CeO2-cube catalysts were prepared via the ESI method, and CeO2-rod and CeO2-cube supports were synthesized by hydrothermal processes. The activity of these catalysts was tested in a high-pressure fixed-bed reactor, and the oxidative degradation of industrial organic raffinate containing the plastic chemical bisphenol A (BPA) was compared with their oxygen vacancy concentration estimated after calcination. The Ru/CeO2-rod catalyst showed higher catalytic activity with 90% BPA conversion at 453 K, 30 bar, 0.5% Ru metal content, 15 O2 to BPA molar ratio, and 2 g-1.h-1 BPA feed WHSV. In contrast, 80% BPA degradation was achieved using the Ru/CeO2-cube catalyst under similar reaction conditions. The higher oxygen vacancy concentration and the higher interfacial surface area between metal and the support of the CeO2-rod supported Ru catalyst triggered the higher BPA degradation at low oxidation conditions. Besides, the atomic ratio, Ce3+/Ce4+, is lower in the Ru/CeO2-rod catalyst than that of the Ru/CeO2-cube catalyst, indicating the higher Ce4+ available in the catalyst, leading to the higher degradation of BPA. Moreover, the Ru/CeO2-rod catalyst possesses {111} planes that boost the generation of energetic Ru to improve the pursuit of the catalyst. The Weisz-Prater modulus and Thiele modulus values indicated that the surface reaction is the rate limitation step and there is no diffusion limitation. TEM, HRTEM, XPS, Raman, H2-TPR, XRD, CO chemisorption and BET surface area analyzers were used to characterize the catalysts.