We investigated crystallographic variations in structure H (sH) hydrates hosting CH 4 and halogenic large-molecule guest substances [halogenic large-molecule guest substance (LMGS)]. The three halogenic LMGSs, namely, chlorocyclohexane (ClCH), bromocyclohexane (BrCH), and iodocyclohexane (ICH), share a common molecular structure (X-cyclohexane). The lattice constants along a and c axes of sH hydrates hosting X-cyclohexane increased with increasing molecular size: ClCH < BrCH < ICH. The c lattice constant was especially dependent on the molecular size, possibly because X-cyclohexanes align along the longitudinal direction of the 5 12 6 8 cage, which coincides with the c-axis. Raman spectroscopy revealed that LMGSs altered the surroundings of CH 4 molecules in the 5 12 and 4 3 5 6 6 3 cages. As the crystal size increases, CH 4 molecules encounter more attractive (less repulsive) guest−host interactions. The wavenumber shifts of the C− H vibrations of CH 4 in the 5 12 and 4 3 5 6 6 3 cages increased with temperature and were slightly greater in the 4 3 5 6 6 3 cages than in the 5 12 cages. Different thermal responses between the 5 12 and 4 3 5 6 6 3 cages may be caused by anisotropic lattice expansion of the sH hydrates. Finally, the phase stabilities of the sH (CH 4 and X-cyclohexane) hydrates were evaluated by an isochoric method. The pressure region of equilibrium pressure−temperature conditions was lower in the sH (CH 4 and X-cyclohexane) hydrates than in the pure CH 4 hydrate system. Moreover, the temperature region of the equilibrium pressure−temperature conditions increased in the order ICH < ClCH < BrCH. The dissociation enthalpies of the sH (CH 4 + ClCH) and sH (CH 4 + ICH) hydrates were estimated as 380 kJ/mol −1 .