Koyanagi T, Wong LY, Inagaki K, Petrauskene OV, MochlyRosen D. Alteration of gene expression during progression of hypertension-induced cardiac dysfunction in rats. Am J Physiol Heart Circ Physiol 295: H220 -H226, 2008. First published May 16, 2008 doi:10.1152/ajpheart.00289.2008.-Hypertension induced by highsalt diet in Dahl salt-sensitive rats leads to compensatory cardiac hypertrophy by ϳ11 wk, cardiac dysfunction at ϳ17 wk, and death from cardiac dysfunction at ϳ21 wk. It is unclear what molecular hallmarks distinguish the compensatory hypertrophy from the decompensated cardiac dysfunction phase. Here we compared the gene expression in rat cardiac tissue from the compensatory hypertrophic phase (11 wk, n ϭ 6) with the cardiac dysfunction phase (17 wk, n ϭ 6) and with age-matched normotensive controls. Messenger RNA levels of 93 genes, selected based on predicted association with cardiac dysfunction, were measured by quantitative real-time PCR. In the hypertrophic phase, the expression of three genes, atrial natriuretic peptide (ANP; P ϭ 0.0089), brain natriuretic peptide (P ϭ 0.0012), and endothelin-1 precursor (P ϭ 0.028), significantly increased, whereas there was decreased expression of 24 other genes including SOD2 (P ϭ 0.0148), sarco(endo)plasmic reticulum Ca 2ϩ -ATPase 2a (P ϭ 0.0002), and ryanodine receptor 2 (P ϭ 0.0319). In the subsequent heart cardiac dysfunction phase, the expression of an additional 20 genes including inducible nitric oxide synthase (NOS; P ϭ 0.0135), angiotensin I-converting enzyme (P ϭ 0.0082), and IL-1 (P Ͻ 0.0001) increased, whereas the expression of seven genes decreased compared with those of age-matched controls. Furthermore, the expression of 22 genes, including prepro-endothelin-1, ANP, angiotensin I-converting enzyme, 1-adrenergic receptor, SOD2, and endothelial NOS, significantly changed in the cardiac dysfunction phase compared with the compensatory hypertrophic phase. Finally, principal component analysis successfully segregated animals with decompensatory cardiac dysfunction from controls, as well as from animals at the compensated hypertrophy phase, suggesting that we have identified molecular markers for each stage of the disease. quantitative polymerase chain reaction; diagnosis; heart failure; left ventricular CURRENTLY, FIVE MILLION PEOPLE suffer from heart failure in the US alone (26), and mortality associated with heart failure increased by 20% from 1993 to 2003, despite considerable advances in pharmacological therapy, device technology, and heart transplantation. Hypertension is one of the major risk factors for left ventricular (LV) dysfunction and heart failure (5, 22). Several studies correlate the physiology of cardiac dysfunction with mRNA expression profiling, using different models and examining different stages of the disease (1, 10, 14, 27). These studies employed microarrays, which provide information on the expression of a large number of genes although the information is not quantitative (29).Here we used the quantitative real-time PCR method...