2019
DOI: 10.1186/s12870-019-1964-y
|View full text |Cite
|
Sign up to set email alerts
|

RNASeq analysis of giant cane reveals the leaf transcriptome dynamics under long-term salt stress

Abstract: Background To compensate for the lack of information about the molecular mechanism involved in Arundo donax L. response to salt stress, we de novo sequenced, assembled and analyzed the A. donax leaf transcriptome subjected to two levels of long-term salt stress (namely, S3 severe and S4 extreme). Results The picture that emerges from the identification of differentially expressed genes is consistent with a salt dose-… Show more

Help me understand this report

Search citation statements

Order By: Relevance

Paper Sections

Select...
2
1
1
1

Citation Types

2
29
0
1

Year Published

2020
2020
2024
2024

Publication Types

Select...
10

Relationship

0
10

Authors

Journals

citations
Cited by 46 publications
(32 citation statements)
references
References 85 publications
(122 reference statements)
2
29
0
1
Order By: Relevance
“…Salt adaptation is both a long-term and dynamic process influenced by multiple genes and involves many morphological, physiological, molecular, and cellular processes [12,14,[32][33][34]. The requirement of bulk protein synthesis as part of the global defense strategy of Arabidopsis has been extensively shown in previous studies [35].…”
Section: Discussionmentioning
confidence: 99%
“…Salt adaptation is both a long-term and dynamic process influenced by multiple genes and involves many morphological, physiological, molecular, and cellular processes [12,14,[32][33][34]. The requirement of bulk protein synthesis as part of the global defense strategy of Arabidopsis has been extensively shown in previous studies [35].…”
Section: Discussionmentioning
confidence: 99%
“…[ 72 ], and multiple Brassica species [ 73 ]. In addition to these systematic investigations, genes of the flavonoid biosynthesis are often detected as differentially expressed in transcriptomic studies without particular focus on this pathway [ 74 , 75 , 76 ]. In depth investigation of the flavonoid biosynthesis starts with the identification of candidate genes for all steps.…”
Section: Introductionmentioning
confidence: 99%
“…In recent years, physiological processes complemented with proteome profiling and/or transcriptome mapping in plants have gained popularity to explore mechanisms of salt tolerance [ 15 , 16 , 17 , 18 ]. Next-generation sequencing (NGS) has become a potential technique to evaluate molecular profiles for crop plants [ 19 ]. It is being applied successfully throughout the world to identify transcriptome variation in plants [ 17 , 20 ].…”
Section: Introductionmentioning
confidence: 99%