With the application of more electric aircraft (MEA) technology, variable frequencies and high power ratings become import features of aero-generators. The brushless synchronous generator, which has a three-stage structure, is the most commonly used type of aero-generator. Due to the variation of operating conditions, the implementation of generator controllers becomes more and more difficult. In this paper, a state space model of a generator is derived and the influence of different operating conditions on the frequency response characteristics of the generator is revealed. Based on a fuzzy PI controller, an additional fuzzy logic controller is applied to modify the PI parameters of the voltage loop by introducing the generator speed to cope with the speed variation. Finally, the results of the simulations and experiments demonstrate that the dual fuzzy PI controller can improve both the steady-state and dynamic performance of the brushless synchronous generator, verifying the previous theoretical study.