17The RNA binding proteins EloR and KhpA are important components of the regulatory 18 network that controls and coordinates cell elongation and division in S. pneumoniae. Loss of 19 either protein reduce cell length, and makes the essential elongasome proteins PBP2b and 20 RodA dispensable. It has been shown previously in formaldehyde crosslinking experiments 21 that EloR co-precipitates with KhpA, indicating that they form a complex in vivo. In the present 22 study, we used 3D modeling and site directed mutagenesis in combination with protein 23 crosslinking to further study the relationship between EloR and KhpA. Protein-protein 24 interaction studies demonstrated that KhpA forms homodimers and that KhpA in addition binds 25 strongly to the KH-II domain of EloR. Site directed mutagenesis identified isoleucine 61 (I61) 26 as crucial for KhpA homodimerization. When substituting I61 with phenylalanine, KhpA lost 27 the ability to homodimerize, while it still interacted strongly with EloR. In contrast, both homo-28 and heterodimerization were lost when I61 was substituted with tyrosine. By expressing these 29 KhpA versions in S. pneumoniae, we were able to show that disruption of EloR/KhpA 30 heterodimerization makes the elongasome redundant in S. pneumoniae. Of note, loss of KhpA 31 homodimerization did not give rise to this phenotype, demonstrating that the EloR/KhpA 32 complex is crucial for regulating the activity of the elongasome. In support of this conclusion, 33 we found that localization of KhpA to the pneumococcal mid-cell region depends on its 34 interaction with EloR. Furthermore, we found that the EloR/KhpA complex co-localizes with 35 FtsZ throughout the cell cycle. 36 Importance. 37 To ensure correct cell division, bacteria need to monitor the progression of cell division and 38 coordinate the activities of cell division proteins accordingly. Understanding the molecular 39 mechanisms behind these regulatory systems is of high academic interest and might facilitate 40 the development of new therapeutics and strategies to combat pathogens. EloR and KhpA form 41 a heterodimer that is part of a signaling pathway controlling cell elongation in the human 42 pathogen S. pneumoniae. Here we have identified amino acids that are crucial for EloR/KhpA 43 heterodimerization, and demonstrated that disruption of the EloR/KhpA interaction renders the 44 cells independent of a functional elongasome. Furthermore, we found the EloR/KhpA complex 45 to co-localize with the division ring (FtsZ) during cell division. 46 47 48 49In most bacteria, the cytoplasmic membrane is surrounded by a peptidoglycan layer, which 50 gives the cell its shape and provides resistance to internal turgor pressure (1). The 51 peptidoglycan sacculus also serves as an anchoring device for surface proteins and other cell 52 wall components such as teichoic acids and extracellular polysaccharides (2-5). During cell 53 division and growth, the peptidoglycan synthesis machineries add new material into the 54 existing cell wall. In ovoid b...