Root system growth and development is highly plastic and is influenced by the surrounding environment. Roots frequently grow in heterogeneous environments that include interactions from neighboring plants and physical impediments in the rhizosphere. To investigate how planting density and physical objects affect root system growth, we grew rice in a transparent gel system in close proximity with another plant or a physical object. Root systems were imaged and reconstructed in three dimensions. Root-root interaction strength was calculated using quantitative metrics that characterize the extent to which the reconstructed root systems overlap each other. Surprisingly, we found the overlap of root systems of the same genotype was significantly higher than that of root systems of different genotypes. Root systems of the same genotype tended to grow toward each other but those of different genotypes appeared to avoid each other. Shoot separation experiments excluded the possibility of aerial interactions, suggesting root communication. Staggered plantings indicated that interactions likely occur at root tips in close proximity. Recognition of obstacles also occurred through root tips, but through physical contact in a size-dependent manner. These results indicate that root systems use two different forms of communication to recognize objects and alter root architecture: root-root recognition, possibly mediated through root exudates, and root-object recognition mediated by physical contact at the root tips. This finding suggests that root tips act as local sensors that integrate rhizosphere information into global root architectural changes.3D reconstruction | imaging | kin recognition P lants interact with the environment in a number of ways (1, 2).Aboveground tissues may identify volatile cues that provide information about their neighbors (3, 4) and detect irradiance, directional light, and light quality (5), whereas belowground tissues, such as roots, can detect changes in soil moisture, nutrient availability, and physical obstacles (6-8). Plants not only detect but also respond to changes in their environment, exhibiting adaptation in their morphology and physiology in response to environmental stimuli (9-14), such as alteration in total root length, root system volume, and root depth (15,16). Phenotypic plasticity of plants in response to environmental heterogeneity may have consequences for plant fitness.Communication among plants is mediated by interactions that take place aboveground (17, 18) and belowground (2,(19)(20)(21). Aboveground interactions have been studied in greater detail, in part because of the accessibility of aerial tissue. However, there is growing interest in root-system architecture and its effect on plant function and fitness (12, 15). Studies of root-system architecture suggest that root systems develop differently in the presence of other root systems. For example, when exposed to the roots of a neighboring plant, common bean plants altered the vertical and horizontal distribution of roo...