In heart and skeletal muscle an S100 protein family member, S100A1, binds to the ryanodine receptor (RyR) and promotes Ca 2؉ release. Using competition binding assays, we further characterized this system in skeletal muscle and showed that Ca 2؉ -S100A1 competes with Ca 2؉ -calmodulin (CaM) for the same binding site on RyR1. In addition, the NMR structure was determined for Ca 2؉ -S100A1 bound to a peptide derived from this CaM/S100A1 binding domain, a region conserved in RyR1 and RyR2 and termed RyRP12 (residues 3616 -3627 in human RyR1). Examination of the S100A1-RyRP12 complex revealed residues of the helical RyRP12 peptide (Lys-3616, Trp-3620, Lys-3622, Leu-3623, Leu-3624, and Lys-3626) that are involved in favorable hydrophobic and electrostatic interactions with Ca 2؉ -S100A1. These same residues were shown previously to be important for RyR1 binding to Ca 2؉ -CaM. A model for regulating muscle contraction is presented in which Ca 2؉ -S100A1 and Ca 2؉ -CaM compete directly for the same binding site on the ryanodine receptor.Excitation coupling is a process by which sarcolemmal depolarization triggers Ca 2ϩ release from the sarcoplasmic reticulum (SR), 4 leading to Ca 2ϩ activation of the thin filaments and muscle fiber contraction. The ryanodine receptor (RyR1) Recently, several studies demonstrated that an S100 protein, S100A1, enhances RyR1-and RyR2-dependent calcium release in both skeletal and cardiac muscle, respectively (5-10). Specifically, S100A1 knock-out skeletal muscle fibers demonstrate decreased Ca 2ϩ transients (6), and adenoviral delivery of S100A1 into failing cardiomyocytes restores myocyte contractile properties (11). Additionally, S100A1 increases [ 3 H]ryanodine binding to RyR1, indicative of increased activation of the channel (5), and S100A1 binds directly to RyR1 in a calciumdependent manner (6). These data suggest a possible therapeutic role of S100A1 in treatment strategies for skeletal and cardiomyopathies (6,8,11). S100A1 is a symmetric homodimer (93 residues/subunit) with each S100A1 subunit having a low affinity pseudo-EF hand and a second high affinity canonical EF hand calcium binding domain (12). The solution structures of apo-and Ca 2ϩ -S100A1 were solved previously using NMR methods (12, 13), and show that a large reorientation of helix 3 occurs in S100A1 upon the addition of calcium. This conformational change exposes a hydrophobic pocket on each S100A1 subunit (12,14), providing a binding site for target proteins such as RyR1 and RyR2. Here we show that a 12-residue peptide (termed RyRP12), derived from the CaM/S100A1-binding site on both RyR1 and RyR2, interacts with a major portion of the target protein-binding site on Ca 2ϩ -S100A1 (6, 15, 16). We present the solution NMR structure of RyRP12 bound to Ca 2ϩ -S100A1, which has several striking similarities to that observed previously for the RyR1 (residues 3614 -3643 in human)-CaM complex (17). Furthermore, competition binding experiments show that Ca 2ϩ -S100A1 competes directly with an RyR antagonist, Ca 2ϩ -CaM, for...