<scp>SIP</scp>1 participates in regulation of flowering time in rice by recruiting OsTrx1 to <i>Ehd1</i>

Jiang, Pengfei; Wang, Shiliang; Zheng, Han; Li, Hao; Zhang, Fei; Su, Yanhua; Xu, Zhenggang; Lin, Haiyan; Qian, Qian; Ding, Yong

doi:10.1111/nph.15122

Cited by 52 publications

(42 citation statements)

References 70 publications

(127 reference statements)

Supporting

Mentioning

Contrasting

Order By: Relevance

“…Take rice for example, HEADING DATE 3a (Hd3a) and Rice FT 1 (RFT1), the two FT homologues, are major florigen proteins with important roles in promoting flowering. The former acts under SD whereas the other functions under LD . Besides, there are also some upstream pathways of Hd3a and RFT1 in rice, including the Heading date1 (Hd1) pathway controlled by photoperiod and Early heading date 1 (Ehd1) pathway which encodes a B‐type response regulator that promotes flowering by controlling the expression of FT‐like genes under SD and LD .…”

Section: Sdgs In Floweringmentioning

confidence: 99%

See 1 more Smart Citation

The function of histone lysine methylation related SET domain group proteins in plants

et al. 2020

View full text Add to dashboard Cite

Histone methylation, which is mediated by the histone lysine (K) methyltransferases (HKMTases), is a mechanism associated with many pathways in eukaryotes. Most HKMTases have a conserved SET (Su(var) 3-9,E(z), Trithorax) domain, while the HKMTases with SET domains are called the SET domain group (SDG) proteins. In plants, only SDG proteins can work as HKMTases. In this review, we introduced the classification of SDG family proteins in plants and the structural characteristics of each subfamily, surmise the functions of SDG family members in plant growth and development processes, including pollen and female gametophyte development, flowering, plant morphology and the responses to stresses. This review will help researchers better understand the SDG proteins and histone methylation in plants and lay a basic foundation for further studies on SDG proteins. K E Y W O R D Shistone lysine (K) methyltransferase, histone methylation, HKMTases, SDG protein, SET domain group

show abstract

Section: Sdgs In Floweringmentioning

confidence: 99%

“…These two proteins, together with SDG708, belong to the SET domain family II. They could function in H3K36me2/3 modifications . On the other hand, a long day‐preferential flowering activator, the OsMADS50 chromatin, can also be methylated by these SDG proteins.…”

Section: Sdgs In Floweringmentioning

confidence: 99%

The function of histone lysine methylation related SET domain group proteins in plants

et al. 2020

View full text Add to dashboard Cite

show abstract

“…In rice, SDG723/OsTrx1 exhibits histone H3 methyltransferase activity in vitro and helps to regulate flowering time [34]. The OsTrx1 protein is specifically recruited to the target gene Ehd1 to promote rice flowering by interacting with a transcription factor, SDG723/OsTrx1/OsSET33 Interaction Protein 1 (SIP1) [35]. SDG701 is likely a major H3K4-specific methyltransferase in rice, thereby contributing to the regulation of multiple processes during rice plant growth and development, such as flowering, gametophyte development, and grain production [36].…”

Section: Introductionmentioning

confidence: 99%

H3K4me2 functions as a repressive epigenetic mark in plants

Wang

Liu

Yin

et al. 2019

Epigenetics & Chromatin

View full text Add to dashboard Cite

Background In animals, H3K4me2 and H3K4me3 are enriched at the transcription start site (TSS) and function as epigenetic marks that regulate gene transcription, but their functions in plants have not been fully characterized. Results We used chromatin immunoprecipitation sequencing to analyze the rice genome-wide changes to H3K4me1/H3K4me2/H3K4me3 following the loss of an H3K4-specific methyltransferase, SDG701. The knockdown of SDG701 resulted in a global decrease in H3K4me2/H3K4me3 levels throughout the rice genome. An RNA-sequencing analysis revealed that many genes related to diverse developmental processes were misregulated in the SDG701 knockdown mutant. In rice, H3K4me3 and H3K36me3 are positively correlated with gene transcription; however, surprisingly, the H3K4me2 level was negatively associated with gene transcription levels. Furthermore, the H3K4me3 level at the TSS region decreased significantly in the genes that exhibited down-regulated expression in the SDG701 knockdown mutant. In contrast, the genes with up-regulated expression in the mutant were associated with a considerable decrease in H3K4me2 levels over the gene body region. Conclusion A comparison of the genome-wide distributions of H3K4me2 in eukaryotes indicated that the H3K4me2 level is not correlated with the gene transcription level in yeast, but is positively and negatively correlated with gene expression in animals and plants, respectively. Our results uncovered H3K4me2 as a novel repressive mark in plants. Electronic supplementary material The online version of this article (10.1186/s13072-019-0285-6) contains supplementary material, which is available to authorized users.

show abstract

“…However, this possibility was excluded because no significant alteration in the H3K27me3 levels was observed within either D4 or D11 gene locus (Supplemental Figure 5C). Therefore, we queried whether POW1 carries out transcriptional regulation by associating with other factors (Sridhar et al, 2006; Jiang et al, 2018). To this end, we screened its potential interactors using a cDNA library with the yeast two-hybrid system.…”

Section: Resultsmentioning

confidence: 99%

Separable regulation of POW1 in TAF2-mediated grain development and BR-mediated leaf angle formation in rice

Zhang

Wang

et al. 2019

Preprint

View full text Add to dashboard Cite

Leaf angle is one of the key factors determining rice plant architecture. However, improvement of the leaf angle appears to be unsuccessful in practical breeding because of the simultaneous occurrence of unfavorable traits such as grain size reduction. In this study, we identified the pow1 (put on weight 1) mutant with enlarged grain size and leaf angle, typical brassinosteroid (BR)-related phenotypes caused by excessive cell proliferation and cell expansion. We show that POW1 encodes a novel protein functioning in grain size regulation by repressing the transcription activity of the interacting protein TAF2, a highly conserved member of the transcription initiation complex TFIID. Loss of function of POW1 increases the phosphorylation of OsBZR1 and decreases the inhibitory effect of OsBZR1 on the transcription of BR biosynthesis genes OsDWARF4 (D4) and D11, thus participates in BR-mediated leaf angle regulation. The separable functions of POW1 in grain size and leaf angle control provide a promising strategy to design high-yielding varieties in which both traits would be favorably developed, i.e., compact plant architecture and increased grain size, thus would promote the high-yield breeding a step forward in rice.

show abstract

SIP1 participates in regulation of flowering time in rice by recruiting OsTrx1 to Ehd1

Cited by 52 publications

References 70 publications

The function of histone lysine methylation related SET domain group proteins in plants

The function of histone lysine methylation related SET domain group proteins in plants

H3K4me2 functions as a repressive epigenetic mark in plants

Separable regulation of POW1 in TAF2-mediated grain development and BR-mediated leaf angle formation in rice

Contact Info

Product

Resources

About