A b s t r a c t β-D-glucosidase (βG) gene from Oenococcus oeni SD-2a and 31MBR was cloned, sequenced and analyzed, also intracellular βG of the two strains was further localized. The results showed that βG gene of the two strains was in high homology (> 99%) to reported βG gene, confirming both strains possess βG activity at the molecular level. Intracellular βG of SD-2a is a mainly soluble protein, existing mostly in the cytoplasm and to some extent in the periplasm. While for 31MBR, intracellular βG is mainly insoluble protein existing in the cytoplasmic membrane. This study provides basic information for further study of the metabolic mechanism of βG from O. oeni SD-2a and 31MBR.
210was cloned, sequenced and analyzed through bioinformatics, also the intracellular βG of the two strains was further localized.O. oeni strains SD-2a and 31MBR, stored in our laboratory, were cultivated as described before (Li et al., 2012a). Bacterial growth was monitored by measuring the OD 600 nm until the mid-log phase (about 40 h and 20 h for SD-2a and 31MBR respectively). Genomic DNA was extracted with Genomic DNA isolation Kit (TaKaRa, Shiga, Japan) as recommended by the manufacturer and verified on a 1% (w/v) agarose gel. Primers 5'TTGTCTAAGATTACTT CAATTATT TCA 3' and 5' TTAACTTTGATTGGCGA GTTTA3' , deduced from the nucleotide sequences of βG gene previously identified in O. oeni PSU-1 (Makarova et al., 2006), were used. For the PCR experiments, 25 ng of genomic DNA isolated from O. oeni SD-2a or 31MBR was added to a 25 μl PCR mixture containing 0.5 U of ExTaq polymerase, 0.2 mM of dNTP mix, 1 × PCR buffer (TaKaRa, Shiga, Japan), and 0.25 mM of each primer. The reaction was carried out at the following temperature profile: 94°C, 4 min; 94°C, 1 min; 58°C, 40 s; 72°C, 1.5 min -35 cycles (using the icycler PCR Bio-Rad). The PCR reaction was terminated at 72°C for 10 min. PCR fragments were analysed on gel electrophoresis by applying 5 μl of sample to 1.0% agarose gel and a 2000 bp ladder (TaKaRa, Shiga, Japan) was used as the standard marker. The amplified fragments were purified with PCR Clean-up Kit (TaKaRa, Shiga, Japan), connected with vector PMD18-T (TaKaRa, Shiga, Japan), and transformed into Escherichia coli DH5α. Plasmid was extracted using Plasmid Extraction Kit (TaKaRa, Shiga, Japan) and sequenced by Takara Biotechnology Co., Ltd. Dalian, China.The alignment of the deduced protein sequences against that of O. oeni PSU-1 was carried out with software Clustalx 1.81. Physical and chemical parameters of deduced amino acid sequences were computed with ProtParam (Gasteiger et al., 2005). The amino acid scale of hydropathicity was defined following the ProtScale (Gasteiger et al., 2005). Transmembrane helices were predicted with TMHMM Server v. 2.0 (http://www. cbs.dtu.dk/services/TMH MM-2.0/). The presence and location of signal peptide cleavage sites in amino acid sequence was predicted with SignalP 4.0 server (http://www.cbs.dtu.dk/services/SignalP/). Finally, the subcellular localization prediction was conducted with PSO...