2008
DOI: 10.3201/eid1405.071116
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Seasonal Cholera from Multiple Small Outbreaks, Rural Bangladesh

Abstract: Clinical and environmental Vibrio cholerae organisms collected from February 2004 through April 2005 were systematically isolated from 2 rural Bangladeshi locales. Their genetic relatedness was evaluated at 5 loci that contained a variable number of tandem repeats (VNTR). The observed minimal overlap in VNTR patterns between the 2 communities was consistent with sequential, small outbreaks from local sources.

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Cited by 72 publications
(79 citation statements)
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“…Interestingly, the amount of DNP triplets varies from 2 to 9 in different V. cholerae strains. These simple sequence repeats, also designated VNTRs (for variable number of tandem repeats), were among a group of different VNTRs identified in a few additional loci of V. cholerae that recently have been utilized for strain typing and phylogeny studies of environmental and clinical isolates (35)(36)(37).…”
Section: Resultsmentioning
confidence: 99%
“…Interestingly, the amount of DNP triplets varies from 2 to 9 in different V. cholerae strains. These simple sequence repeats, also designated VNTRs (for variable number of tandem repeats), were among a group of different VNTRs identified in a few additional loci of V. cholerae that recently have been utilized for strain typing and phylogeny studies of environmental and clinical isolates (35)(36)(37).…”
Section: Resultsmentioning
confidence: 99%
“…The identity of presumptive colonies was confirmed by using a battery of specific biochemical, serological, and molecular methods. Five loci for MLVA were analyzed by using methods described in previous studies (10)(11)(12). Genomic DNA of 76 confirmed V. cholerae strains along with eight reference strains were subjected to next generation whole-genome Illumina and hybrid Illumina/454 sequencing.…”
Section: Methodsmentioning
confidence: 99%
“…Multilocus variable-number tandem repeat (VNTR) analysis (MLVA), a useful tool for tracking V. cholerae (10) and resolving distinct populations of clinical isolates from different geographic regions (11,12), was used to examine the clinical and environmental V. cholerae O1 isolates from Haiti and other geographical locations ( (Table S1), was performed for this study. Genome comparisons of these 76 genomes and an additional 27 V. cholerae genomes available in the public database were conducted to ascertain the degree of genomic diversity within V. cholerae isolates from the same epidemics.…”
mentioning
confidence: 99%
“…The World Health Organization (WHO) estimates that annually, about 3 to 5 million people are affected worldwide by cholera and over 100,000 cases result in death (http://www.who.int/mediacentre/factsheets/fs107/en/index.html accessed on 11/12/2012). Vibrio cholerae is a natural inhabitant of the aquatic environment, 1 which with evidence of new biotypes emerging from its environmental reservoir, 2,3 indicates that cholera bacteria cannot be eradicated. Because cholera outbreaks will continue to occur over time, the most effective means of controlling or preventing the disease is to minimize exposure to pathogenic strains and/or high concentrations of cholera bacteria.…”
Section: Introductionmentioning
confidence: 99%