Abstract. Plants emit considerable quantities of volatile organic compounds (VOCs), the identity and amount of which vary with temperature, light and other environmental factors. Portable photosynthesis systems are a useful method for simultaneously quantifying in situ leaf-level emissions of VOCs and plant physiology. We present a comprehensive characterization of the LI-6800 portable photosynthesis system's ability to be coupled to trace gas detectors and measure leaf-level trace gas emissions, including limits in flow rates, environmental parameters, and VOC backgrounds. Instrument contaminants from the LI-6800 can be substantial, but are dominantly complex molecules such as siloxanes that are structurally dissimilar to biogenic VOCs and thus unlikely to interfere with most leaf-level emissions measurements. We validate the method by comparing CO2 assimilation calculated internally by the portable photosynthesis system to measurements taken with an external CO2 gas analyzer; these assimilation measurements agree within 1 %. We also demonstrate both online and offline measurements of plant trace gas exchange using the LI-6800. Offline measurements by pre-concentration on adsorbent cartridges enable detection of a broad suite of VOCs, including monoterpenes (e.g., limonene) and aldehydes (e.g., decanal). Online measurements can be more challenging if flow rates require dilution with ultra-pure zero air. We use high resolution time-of-flight chemical ionization mass spectrometry coupled to the LI-6800 to measure direct plant emission of formic acid.