The stable oxygen isotope (δ 18 O) values of biogenic calcium carbonates (CaCO3) present in hard tissues of marine organisms vary with the δ 18 O of the surrounding seawater (δ 18 Osw) and water temperature. Consequently, the ambient water temperature when marine organisms existed can be estimated using δ 18 O of CaCO3 with δ 18 Osw. Thus, the aims of this study were to reveal the spatiotemporal variations in δ 18 Osw and their correlations with salinity in the East Asian marginal seas. We collected seawater samples (n = 2222) at 1394 stations around Japan, primarily from the surface layer of the East China Sea (ECS) and Sea of Japan (SOJ), from 2015 to 2021. We analyzed δ 18 Osw and the stable hydrogen isotope of seawater (δDsw) along with the measured water temperature and salinity. The δ 18 Osw and δDsw values ranged from −3.48‰ to +0.45‰, and −21.5‰ to +2.3‰, respectively. In our full data, both δ 18 Osw and δDsw had positive linear relationships with salinity as follows: δ 18 Osw = 0.235 × salinity − 7.94 (r 2 = 0.85) and δDsw = 1.56 × salinity − 52.9 (r 2 = 0.85). Furthermore, the relationship between δ 18 Osw and δDsw for full data as follows: δDsw = 6.44 × δ 18 Osw − 0.18 (r 2 = 0.96). These relationships varied across seasons, areas (the ECS or SOJ), and water depths. In particular, δ 18 Osw and δDsw of less-saline water were different in the ECS and SOJ. These fine-scale, wide-range, and highprecision δ 18 Osw and δDsw datasets can contribute to paleoceanography, environmental analysis, oceanography, and fisheries science.