The aim of this study was to analyse the milk parameters and the chemical, nutritional, and sensory characteristics of cheeses made from the milk of three groups of goats: native Carpathian goat, Anglonubian and crossbred goats (Saanen x Alpine). For this study, milk was collected three times during the grazing season and was processed into rennet semi-hard cheeses according to a traditional recipe in a pre-farm cheese dairy. Samples of the milk were subjected to physicochemical analyses. The chemical composition, vitamin, macronutrient content, and fatty acid profile of the cheeses were determined. The cheeses were also subjected to organoleptic evaluation. The results showed that the factors studied, such as breed and month of milking, had a significant effect on the physicochemical properties and chemical composition of goat milk. The month of milking affected all the milk characteristics studied, with September having the highest values of acidity, dry matter, fat and protein content. The month did not affect the level of basic components in the cheeses, but it influenced the content of vitamins and macronutrients; the cheeses produced in September had significantly higher levels of Mg, K, and vitamin E. The month of milking had, as did the breed of goat, a significant effect on the profile of most fatty acids in the cheeses. As for the breed factor, it affected both the chemical composition and sensory value of the cheeses. Cheeses made from the milk of the native Carpathian goat had the best health-promoting properties: a more favourable fatty acid profile, the lowest PUFA-6/3 ratio, and the lowest atherogenic index. According to the panellists, cheese from the milk of Carpathian goats also had the most distinctive aroma, typical for goat cheese. The research shows that the cheeses made from the milk of the native Carpathian goat had the best health-promoting properties, which confirms the need for further popularisation of the breed and can be the basis for marketing more products.