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MDS/MPN: cytogenetic, molecular genetics and signaling abnormalitiesChromosome analysis using conventional cytogenetics and high-resolution single nucleotide polymorphism array karyotyping (SNP-A) reveals chromosome abnormalities in 70% of MDS/MPN patients. 7 Most of these are aneuploidies (trisomy 8, monosomy 7) or deletions (del7q, del13q, del20q); a minority have reciprocal translocations involving diverse tyrosine kinase (TK) fusion genes. 8,9 Some of these fusions are listed separately within the current WHO classification: 'myeloid and lymphoid neoplasms with eosinophilia' (MLN-eo) and abnormalities of PDGFRA, PDGFRB and FGFR1. Fusions involving other kinases are also seen in patients with MDS/MPN or MPNs. 10 Fusions involving PDGFRA, PDGFRB and ABL1 are important to recognize as they confer sensitivity to TK inhibitors (TKIs), such as imatinib. 11 Other fusions involving FGFR1 or JAK2 are insensitive to imatinib but may respond to ponatinib or ruxolitinib, respectively. [12][13][14][15][16] Most mutant genes fall into four functional classes: signaling, epigenetic, splicing and transcription ( Figure 2). [17][18][19][20] Signaling mutations result in aberrant activation of proliferative and anti-apoptotic pathways normally induced by growth factors (GFs). In addition to the TK gene fusions mentioned above, mutations have been described in GF receptors (CSF3R), downstream cytokine receptor signaling intermediates (JAK2, NRAS, KRAS) and negative regulators of signaling pathways (PTPN11, CBL, NF1). [21][22][23][24][25][26][27] Mutations involving RAS are demonstrable in 90% of JMML cases and may emerge as a defining feature of this condition. 28 Signaling mutations occur in approximately 50% of CMML patients and correlate with a myeloproliferative phenotype and enhancement of in vitro sensitivity to GM-CSF. 29 Up to 80% of patients with RARS-T have activated JAK-STAT signaling as a consequence of the presence of JAK2 V617F or mutations in MPL [encoding for the thrombopoietin receptor (Tpo-R)]. 30 In mice, abrogation of Notch signaling leads to a MDS/MPN phenotype, but its relevance in humans is unknown.
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MDS/MPN: nuclear events -epigenetics, spliceosomes and transcription factorsMutations in genes encoding epigenetic regulators are common in MDS/MPN. [32][33][34][35] The most frequently mutated genes are TET2 and ASXL1, followed by SRSF2, IDH1/2, EZH2, SUZ12, EED and UTX. 36 The interaction between epigenetic mutations is complex, and apart from the general mutual exclusivity of TET2 and IDH1/2 mutations, no clear patterns have emerged. 37,38 Mutations in elements involved in the recognition and processing of 3'-mRNA splice sites are also common in MDS/MPN. 39 Around 50% of CMML patients have mutations involving SRSF2, with a further 20% exhibiting mutations in other splicing complex genes (SF3B1, U2AF35, U2AF65 and SF3A1). 34,35,40,41 In addition, SF3B1 mutations are present in 72% of patients with RARS-T. 42,43 These SF3B1 mutations are...