Cysteine thiyl radicals engage in reversible intramolecular hydrogen transfer reactions with amino acid residues in peptides and proteins. These reactions can be experimentally demonstrated through covalent H/D exchange when experiments are carried out in D2O. To this end, hydrogen transfer reactions have been observed between Cys thiyl radicals and Gly, Ala, Ser, Val and Leu in both model peptides and a protein, insulin. The relevance of such reactions for protein oxidation under conditions of oxidative stress is discussed.